Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps4aQ8VEJ9 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Vps4aQ8VEJ9 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Vps4aQ8VEJ9 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Vps4aQ8VEJ9 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Vps4aQ8VEJ9 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Vps4aQ8VEJ9 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Vps4aQ8VEJ9 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.33■□□□□ 0.05
Vps4aQ8VEJ9 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Vps4aQ8VEJ9 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Vps4aQ8VEJ9 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps4aQ8VEJ9 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps4aQ8VEJ9 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vps4aQ8VEJ9 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.33■□□□□ 0.04
Vps4aQ8VEJ9 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps4aQ8VEJ9 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.33■□□□□ 0.04
Vps4aQ8VEJ9 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vps4aQ8VEJ9 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.33■□□□□ 0.04
Vps4aQ8VEJ9 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.33■□□□□ 0.04
Vps4aQ8VEJ9 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vps4aQ8VEJ9 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.33■□□□□ 0.04
Vps4aQ8VEJ9 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vps4aQ8VEJ9 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Vps4aQ8VEJ9 Gm10566-201ENSMUST00000086739 996 ntBASIC15.33■□□□□ 0.04
Vps4aQ8VEJ9 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps4aQ8VEJ9 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps4aQ8VEJ9 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps4aQ8VEJ9 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Vps4aQ8VEJ9 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps4aQ8VEJ9 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps4aQ8VEJ9 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps4aQ8VEJ9 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vps4aQ8VEJ9 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps4aQ8VEJ9 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps4aQ8VEJ9 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vps4aQ8VEJ9 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps4aQ8VEJ9 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Vps4aQ8VEJ9 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps4aQ8VEJ9 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps4aQ8VEJ9 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps4aQ8VEJ9 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vps4aQ8VEJ9 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vps4aQ8VEJ9 Gm18733-201ENSMUST00000173950 856 ntBASIC15.32■□□□□ 0.04
Vps4aQ8VEJ9 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
Vps4aQ8VEJ9 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vps4aQ8VEJ9 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.32■□□□□ 0.04
Vps4aQ8VEJ9 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps4aQ8VEJ9 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vps4aQ8VEJ9 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.32■□□□□ 0.04
Vps4aQ8VEJ9 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps4aQ8VEJ9 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps4aQ8VEJ9 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps4aQ8VEJ9 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps4aQ8VEJ9 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps4aQ8VEJ9 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.32■□□□□ 0.04
Vps4aQ8VEJ9 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps4aQ8VEJ9 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vps4aQ8VEJ9 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps4aQ8VEJ9 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps4aQ8VEJ9 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps4aQ8VEJ9 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps4aQ8VEJ9 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps4aQ8VEJ9 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.31■□□□□ 0.04
Vps4aQ8VEJ9 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps4aQ8VEJ9 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps4aQ8VEJ9 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps4aQ8VEJ9 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.31■□□□□ 0.04
Vps4aQ8VEJ9 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Vps4aQ8VEJ9 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.31■□□□□ 0.04
Vps4aQ8VEJ9 Gm43347-201ENSMUST00000200226 580 ntBASIC15.31■□□□□ 0.04
Vps4aQ8VEJ9 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.31■□□□□ 0.04
Vps4aQ8VEJ9 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.31■□□□□ 0.04
Vps4aQ8VEJ9 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps4aQ8VEJ9 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps4aQ8VEJ9 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps4aQ8VEJ9 Prob1-201ENSMUST00000097619 3021 ntBASIC15.31■□□□□ 0.04
Vps4aQ8VEJ9 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps4aQ8VEJ9 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps4aQ8VEJ9 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps4aQ8VEJ9 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps4aQ8VEJ9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps4aQ8VEJ9 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps4aQ8VEJ9 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Vps4aQ8VEJ9 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps4aQ8VEJ9 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps4aQ8VEJ9 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.31■□□□□ 0.04
Vps4aQ8VEJ9 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Vps4aQ8VEJ9 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Vps4aQ8VEJ9 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps4aQ8VEJ9 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Vps4aQ8VEJ9 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps4aQ8VEJ9 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Vps4aQ8VEJ9 Gm13884-201ENSMUST00000118103 829 ntBASIC15.3■□□□□ 0.04
Vps4aQ8VEJ9 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps4aQ8VEJ9 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.3■□□□□ 0.04
Vps4aQ8VEJ9 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps4aQ8VEJ9 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Vps4aQ8VEJ9 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps4aQ8VEJ9 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps4aQ8VEJ9 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms