Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Lsm1Q8VC85 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm1Q8VC85 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Lsm1Q8VC85 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm1Q8VC85 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm1Q8VC85 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm1Q8VC85 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.15■□□□□ 0.02
Lsm1Q8VC85 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.15■□□□□ 0.02
Lsm1Q8VC85 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm1Q8VC85 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm1Q8VC85 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm1Q8VC85 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm1Q8VC85 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Lsm1Q8VC85 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm1Q8VC85 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm1Q8VC85 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.15■□□□□ 0.02
Lsm1Q8VC85 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm1Q8VC85 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm1Q8VC85 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm1Q8VC85 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.14■□□□□ 0.01
Lsm1Q8VC85 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm1Q8VC85 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Lsm1Q8VC85 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm1Q8VC85 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm1Q8VC85 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Lsm1Q8VC85 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm1Q8VC85 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm1Q8VC85 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm1Q8VC85 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm1Q8VC85 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm1Q8VC85 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm1Q8VC85 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Lsm1Q8VC85 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.14■□□□□ 0.01
Lsm1Q8VC85 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm1Q8VC85 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm1Q8VC85 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm1Q8VC85 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm1Q8VC85 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm1Q8VC85 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Lsm1Q8VC85 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm1Q8VC85 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm1Q8VC85 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm1Q8VC85 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm1Q8VC85 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm1Q8VC85 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm1Q8VC85 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Lsm1Q8VC85 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm1Q8VC85 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm1Q8VC85 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm1Q8VC85 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm1Q8VC85 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm1Q8VC85 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm1Q8VC85 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Lsm1Q8VC85 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.13■□□□□ 0.01
Lsm1Q8VC85 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm1Q8VC85 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.13■□□□□ 0.01
Lsm1Q8VC85 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Lsm1Q8VC85 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm1Q8VC85 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.13■□□□□ 0.01
Lsm1Q8VC85 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm1Q8VC85 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm1Q8VC85 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm1Q8VC85 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm1Q8VC85 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm1Q8VC85 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Lsm1Q8VC85 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm1Q8VC85 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm1Q8VC85 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm1Q8VC85 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm1Q8VC85 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm1Q8VC85 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Lsm1Q8VC85 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm1Q8VC85 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm1Q8VC85 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm1Q8VC85 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm1Q8VC85 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm1Q8VC85 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm1Q8VC85 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm1Q8VC85 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Lsm1Q8VC85 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Lsm1Q8VC85 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm1Q8VC85 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm1Q8VC85 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm1Q8VC85 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm1Q8VC85 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm1Q8VC85 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm1Q8VC85 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Lsm1Q8VC85 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm1Q8VC85 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm1Q8VC85 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm1Q8VC85 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm1Q8VC85 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm1Q8VC85 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Lsm1Q8VC85 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm1Q8VC85 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm1Q8VC85 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.11■□□□□ 0.01
Lsm1Q8VC85 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm1Q8VC85 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm1Q8VC85 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.11■□□□□ 0.01
Lsm1Q8VC85 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms