Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.91□□□□□ -0.34
Nup35Q8R4R6 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup35Q8R4R6 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.91□□□□□ -0.34
Nup35Q8R4R6 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup35Q8R4R6 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.91□□□□□ -0.34
Nup35Q8R4R6 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.91□□□□□ -0.34
Nup35Q8R4R6 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup35Q8R4R6 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup35Q8R4R6 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup35Q8R4R6 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Nup35Q8R4R6 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup35Q8R4R6 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nup35Q8R4R6 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup35Q8R4R6 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Nup35Q8R4R6 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.9□□□□□ -0.34
Nup35Q8R4R6 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup35Q8R4R6 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup35Q8R4R6 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Nup35Q8R4R6 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.9□□□□□ -0.34
Nup35Q8R4R6 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup35Q8R4R6 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup35Q8R4R6 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup35Q8R4R6 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup35Q8R4R6 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup35Q8R4R6 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup35Q8R4R6 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup35Q8R4R6 Gm715-201ENSMUST00000117865 831 ntBASIC12.9□□□□□ -0.34
Nup35Q8R4R6 Gm21814-202ENSMUST00000203277 873 ntBASIC12.9□□□□□ -0.34
Nup35Q8R4R6 Slc35b2-207ENSMUST00000226086 850 ntBASIC12.9□□□□□ -0.34
Nup35Q8R4R6 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup35Q8R4R6 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Nup35Q8R4R6 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup35Q8R4R6 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nup35Q8R4R6 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup35Q8R4R6 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup35Q8R4R6 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup35Q8R4R6 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup35Q8R4R6 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup35Q8R4R6 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup35Q8R4R6 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup35Q8R4R6 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup35Q8R4R6 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup35Q8R4R6 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nup35Q8R4R6 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup35Q8R4R6 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup35Q8R4R6 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup35Q8R4R6 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nup35Q8R4R6 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup35Q8R4R6 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup35Q8R4R6 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC12.89□□□□□ -0.35
Nup35Q8R4R6 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nup35Q8R4R6 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC12.89□□□□□ -0.35
Nup35Q8R4R6 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup35Q8R4R6 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Nup35Q8R4R6 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nup35Q8R4R6 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup35Q8R4R6 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup35Q8R4R6 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup35Q8R4R6 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup35Q8R4R6 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Nup35Q8R4R6 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Nup35Q8R4R6 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC12.89□□□□□ -0.35
Nup35Q8R4R6 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nup35Q8R4R6 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nup35Q8R4R6 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Nup35Q8R4R6 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup35Q8R4R6 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nup35Q8R4R6 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup35Q8R4R6 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup35Q8R4R6 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup35Q8R4R6 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nup35Q8R4R6 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Nup35Q8R4R6 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup35Q8R4R6 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Nup35Q8R4R6 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup35Q8R4R6 Spsb2-203ENSMUST00000112473 1322 ntBASIC12.88□□□□□ -0.35
Nup35Q8R4R6 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup35Q8R4R6 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup35Q8R4R6 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC12.88□□□□□ -0.35
Nup35Q8R4R6 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nup35Q8R4R6 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Nup35Q8R4R6 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup35Q8R4R6 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Nup35Q8R4R6 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nup35Q8R4R6 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup35Q8R4R6 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Nup35Q8R4R6 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Nup35Q8R4R6 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.88□□□□□ -0.35
Nup35Q8R4R6 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup35Q8R4R6 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup35Q8R4R6 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup35Q8R4R6 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC12.88□□□□□ -0.35
Nup35Q8R4R6 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nup35Q8R4R6 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC12.88□□□□□ -0.35
Nup35Q8R4R6 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Nup35Q8R4R6 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup35Q8R4R6 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup35Q8R4R6 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Nup35Q8R4R6 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup35Q8R4R6 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms