Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc58Q8R3Q6 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc58Q8R3Q6 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc58Q8R3Q6 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc58Q8R3Q6 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc58Q8R3Q6 Gm36967-201ENSMUST00000193814 266 ntBASIC14.19□□□□□ -0.14
Ccdc58Q8R3Q6 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc58Q8R3Q6 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ccdc58Q8R3Q6 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.19□□□□□ -0.14
Ccdc58Q8R3Q6 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc58Q8R3Q6 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc58Q8R3Q6 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ccdc58Q8R3Q6 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc58Q8R3Q6 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc58Q8R3Q6 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc58Q8R3Q6 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccdc58Q8R3Q6 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.18□□□□□ -0.14
Ccdc58Q8R3Q6 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc58Q8R3Q6 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc58Q8R3Q6 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc58Q8R3Q6 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc58Q8R3Q6 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc58Q8R3Q6 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc58Q8R3Q6 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc58Q8R3Q6 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc58Q8R3Q6 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc58Q8R3Q6 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc58Q8R3Q6 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccdc58Q8R3Q6 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.18□□□□□ -0.14
Ccdc58Q8R3Q6 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.18□□□□□ -0.14
Ccdc58Q8R3Q6 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc58Q8R3Q6 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccdc58Q8R3Q6 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc58Q8R3Q6 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc58Q8R3Q6 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc58Q8R3Q6 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc58Q8R3Q6 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc58Q8R3Q6 Phf7-203ENSMUST00000226565 1971 ntBASIC14.18□□□□□ -0.14
Ccdc58Q8R3Q6 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc58Q8R3Q6 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccdc58Q8R3Q6 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc58Q8R3Q6 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc58Q8R3Q6 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc58Q8R3Q6 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc58Q8R3Q6 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc58Q8R3Q6 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc58Q8R3Q6 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc58Q8R3Q6 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc58Q8R3Q6 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc58Q8R3Q6 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc58Q8R3Q6 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc58Q8R3Q6 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc58Q8R3Q6 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc58Q8R3Q6 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc58Q8R3Q6 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc58Q8R3Q6 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc58Q8R3Q6 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc58Q8R3Q6 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc58Q8R3Q6 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc58Q8R3Q6 Mir1199-201ENSMUST00000117015 119 ntBASIC14.17□□□□□ -0.14
Ccdc58Q8R3Q6 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
Ccdc58Q8R3Q6 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.17□□□□□ -0.14
Ccdc58Q8R3Q6 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc58Q8R3Q6 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC14.17□□□□□ -0.14
Ccdc58Q8R3Q6 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc58Q8R3Q6 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc58Q8R3Q6 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ccdc58Q8R3Q6 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc58Q8R3Q6 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc58Q8R3Q6 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc58Q8R3Q6 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc58Q8R3Q6 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc58Q8R3Q6 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc58Q8R3Q6 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc58Q8R3Q6 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc58Q8R3Q6 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc58Q8R3Q6 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc58Q8R3Q6 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc58Q8R3Q6 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc58Q8R3Q6 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc58Q8R3Q6 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.16□□□□□ -0.14
Ccdc58Q8R3Q6 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc58Q8R3Q6 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc58Q8R3Q6 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc58Q8R3Q6 Sybu-209ENSMUST00000228639 4113 ntBASIC14.16□□□□□ -0.14
Ccdc58Q8R3Q6 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc58Q8R3Q6 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc58Q8R3Q6 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc58Q8R3Q6 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc58Q8R3Q6 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Ccdc58Q8R3Q6 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc58Q8R3Q6 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC14.16□□□□□ -0.14
Ccdc58Q8R3Q6 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.16□□□□□ -0.14
Ccdc58Q8R3Q6 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc58Q8R3Q6 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc58Q8R3Q6 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.16□□□□□ -0.14
Ccdc58Q8R3Q6 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc58Q8R3Q6 Gm44450-201ENSMUST00000199528 114 ntBASIC14.16□□□□□ -0.14
Ccdc58Q8R3Q6 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc58Q8R3Q6 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms