Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.74■□□□□ 0.11
Zcchc9Q8R1J3 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Zcchc9Q8R1J3 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Zcchc9Q8R1J3 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.74■□□□□ 0.11
Zcchc9Q8R1J3 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.74■□□□□ 0.11
Zcchc9Q8R1J3 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Zcchc9Q8R1J3 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Zcchc9Q8R1J3 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.74■□□□□ 0.11
Zcchc9Q8R1J3 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Zcchc9Q8R1J3 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Zcchc9Q8R1J3 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Zcchc9Q8R1J3 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Zcchc9Q8R1J3 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Zcchc9Q8R1J3 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Zcchc9Q8R1J3 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Zcchc9Q8R1J3 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Zcchc9Q8R1J3 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Zcchc9Q8R1J3 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.74■□□□□ 0.11
Zcchc9Q8R1J3 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Zcchc9Q8R1J3 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Zcchc9Q8R1J3 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Zcchc9Q8R1J3 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Zcchc9Q8R1J3 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Zcchc9Q8R1J3 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Zcchc9Q8R1J3 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Zcchc9Q8R1J3 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.73■□□□□ 0.11
Zcchc9Q8R1J3 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Zcchc9Q8R1J3 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Zcchc9Q8R1J3 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.73■□□□□ 0.11
Zcchc9Q8R1J3 Gm14140-201ENSMUST00000119999 995 ntBASIC15.73■□□□□ 0.11
Zcchc9Q8R1J3 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.73■□□□□ 0.11
Zcchc9Q8R1J3 Gm11780-201ENSMUST00000136880 516 ntBASIC15.73■□□□□ 0.11
Zcchc9Q8R1J3 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.73■□□□□ 0.11
Zcchc9Q8R1J3 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Zcchc9Q8R1J3 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Zcchc9Q8R1J3 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.73■□□□□ 0.11
Zcchc9Q8R1J3 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Zcchc9Q8R1J3 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Zcchc9Q8R1J3 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Zcchc9Q8R1J3 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Zcchc9Q8R1J3 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
Zcchc9Q8R1J3 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Zcchc9Q8R1J3 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Zcchc9Q8R1J3 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Zcchc9Q8R1J3 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Zcchc9Q8R1J3 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Zcchc9Q8R1J3 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Zcchc9Q8R1J3 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Zcchc9Q8R1J3 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Zcchc9Q8R1J3 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Zcchc9Q8R1J3 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Zcchc9Q8R1J3 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Zcchc9Q8R1J3 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Zcchc9Q8R1J3 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Zcchc9Q8R1J3 Gm43575-201ENSMUST00000196420 516 ntBASIC15.72■□□□□ 0.11
Zcchc9Q8R1J3 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Zcchc9Q8R1J3 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.72■□□□□ 0.11
Zcchc9Q8R1J3 Gm8655-201ENSMUST00000221159 852 ntBASIC15.72■□□□□ 0.11
Zcchc9Q8R1J3 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Zcchc9Q8R1J3 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Zcchc9Q8R1J3 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Zcchc9Q8R1J3 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Zcchc9Q8R1J3 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Zcchc9Q8R1J3 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Zcchc9Q8R1J3 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.72■□□□□ 0.11
Zcchc9Q8R1J3 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Zcchc9Q8R1J3 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Zcchc9Q8R1J3 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.72■□□□□ 0.11
Zcchc9Q8R1J3 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Zcchc9Q8R1J3 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.72■□□□□ 0.11
Zcchc9Q8R1J3 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Zcchc9Q8R1J3 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Zcchc9Q8R1J3 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Zcchc9Q8R1J3 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Zcchc9Q8R1J3 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Zcchc9Q8R1J3 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Zcchc9Q8R1J3 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Zcchc9Q8R1J3 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Zcchc9Q8R1J3 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Zcchc9Q8R1J3 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.71■□□□□ 0.11
Zcchc9Q8R1J3 Gm13036-201ENSMUST00000117799 748 ntBASIC15.71■□□□□ 0.11
Zcchc9Q8R1J3 Gm14494-201ENSMUST00000118786 435 ntBASIC15.71■□□□□ 0.11
Zcchc9Q8R1J3 Gm9172-201ENSMUST00000212092 954 ntBASIC15.71■□□□□ 0.11
Zcchc9Q8R1J3 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Zcchc9Q8R1J3 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Zcchc9Q8R1J3 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Zcchc9Q8R1J3 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Zcchc9Q8R1J3 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Zcchc9Q8R1J3 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Zcchc9Q8R1J3 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Zcchc9Q8R1J3 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Zcchc9Q8R1J3 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Zcchc9Q8R1J3 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Zcchc9Q8R1J3 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Zcchc9Q8R1J3 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Zcchc9Q8R1J3 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Zcchc9Q8R1J3 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
Zcchc9Q8R1J3 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Zcchc9Q8R1J3 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Zcchc9Q8R1J3 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms