Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sf3a1Q8K4Z5 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC19.31■□□□□ 0.68
Sf3a1Q8K4Z5 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sf3a1Q8K4Z5 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Gm4609-201ENSMUST00000106443 1002 ntBASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Gm5138-201ENSMUST00000113842 1002 ntBASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Gm15191-201ENSMUST00000117933 1000 ntBASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Gm12182-201ENSMUST00000118655 1008 ntBASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Gm13882-201ENSMUST00000120886 1002 ntBASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Gm10284-201ENSMUST00000145057 1005 ntBASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Gm10481-201ENSMUST00000179228 1002 ntBASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Gm2574-201ENSMUST00000181051 1002 ntBASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Gm3200-201ENSMUST00000181493 1002 ntBASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Gm8825-201ENSMUST00000182565 998 ntBASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Gm4518-201ENSMUST00000182638 718 ntBASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Gm8330-201ENSMUST00000182754 1008 ntBASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Gm4575-201ENSMUST00000182991 1002 ntBASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Gm8709-201ENSMUST00000183230 1012 ntBASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Gm10293-201ENSMUST00000076317 1002 ntBASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Gm6316-201ENSMUST00000082064 1020 ntBASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Gm8784-201ENSMUST00000222096 1435 ntBASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sf3a1Q8K4Z5 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
Sf3a1Q8K4Z5 Gm38327-201ENSMUST00000195852 1755 ntBASIC19.29■□□□□ 0.68
Sf3a1Q8K4Z5 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sf3a1Q8K4Z5 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sf3a1Q8K4Z5 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sf3a1Q8K4Z5 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Sf3a1Q8K4Z5 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sf3a1Q8K4Z5 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sf3a1Q8K4Z5 Gm19430-201ENSMUST00000193847 2137 ntBASIC19.29■□□□□ 0.68
Sf3a1Q8K4Z5 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sf3a1Q8K4Z5 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC19.29■□□□□ 0.68
Sf3a1Q8K4Z5 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC19.29■□□□□ 0.68
Sf3a1Q8K4Z5 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sf3a1Q8K4Z5 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sf3a1Q8K4Z5 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sf3a1Q8K4Z5 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sf3a1Q8K4Z5 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sf3a1Q8K4Z5 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sf3a1Q8K4Z5 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sf3a1Q8K4Z5 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC19.28■□□□□ 0.68
Sf3a1Q8K4Z5 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sf3a1Q8K4Z5 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sf3a1Q8K4Z5 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sf3a1Q8K4Z5 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sf3a1Q8K4Z5 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Sf3a1Q8K4Z5 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC19.28■□□□□ 0.68
Sf3a1Q8K4Z5 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sf3a1Q8K4Z5 AC159301.1-201ENSMUST00000225130 1182 ntBASIC19.28■□□□□ 0.68
Sf3a1Q8K4Z5 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sf3a1Q8K4Z5 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sf3a1Q8K4Z5 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sf3a1Q8K4Z5 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sf3a1Q8K4Z5 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sf3a1Q8K4Z5 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sf3a1Q8K4Z5 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sf3a1Q8K4Z5 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Sf3a1Q8K4Z5 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sf3a1Q8K4Z5 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sf3a1Q8K4Z5 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sf3a1Q8K4Z5 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Sf3a1Q8K4Z5 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sf3a1Q8K4Z5 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sf3a1Q8K4Z5 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sf3a1Q8K4Z5 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC19.27■□□□□ 0.68
Sf3a1Q8K4Z5 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sf3a1Q8K4Z5 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC19.27■□□□□ 0.68
Sf3a1Q8K4Z5 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC19.27■□□□□ 0.68
Sf3a1Q8K4Z5 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sf3a1Q8K4Z5 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Sf3a1Q8K4Z5 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms