Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf4Q8K4J2 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf4Q8K4J2 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ebf4Q8K4J2 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ebf4Q8K4J2 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf4Q8K4J2 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf4Q8K4J2 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf4Q8K4J2 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf4Q8K4J2 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf4Q8K4J2 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.44□□□□□ -0.1
Ebf4Q8K4J2 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf4Q8K4J2 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.44□□□□□ -0.1
Ebf4Q8K4J2 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf4Q8K4J2 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf4Q8K4J2 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf4Q8K4J2 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ebf4Q8K4J2 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf4Q8K4J2 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf4Q8K4J2 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.44□□□□□ -0.1
Ebf4Q8K4J2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.44□□□□□ -0.1
Ebf4Q8K4J2 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.44□□□□□ -0.1
Ebf4Q8K4J2 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf4Q8K4J2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ebf4Q8K4J2 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf4Q8K4J2 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ebf4Q8K4J2 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf4Q8K4J2 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ebf4Q8K4J2 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf4Q8K4J2 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf4Q8K4J2 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf4Q8K4J2 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf4Q8K4J2 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf4Q8K4J2 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf4Q8K4J2 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.44□□□□□ -0.1
Ebf4Q8K4J2 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ebf4Q8K4J2 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.43□□□□□ -0.1
Ebf4Q8K4J2 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ebf4Q8K4J2 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ebf4Q8K4J2 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ebf4Q8K4J2 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.43□□□□□ -0.1
Ebf4Q8K4J2 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ebf4Q8K4J2 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ebf4Q8K4J2 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.43□□□□□ -0.1
Ebf4Q8K4J2 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ebf4Q8K4J2 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ebf4Q8K4J2 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ebf4Q8K4J2 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ebf4Q8K4J2 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ebf4Q8K4J2 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ebf4Q8K4J2 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ebf4Q8K4J2 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ebf4Q8K4J2 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC14.43□□□□□ -0.1
Ebf4Q8K4J2 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.43□□□□□ -0.1
Ebf4Q8K4J2 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ebf4Q8K4J2 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ebf4Q8K4J2 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ebf4Q8K4J2 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ebf4Q8K4J2 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.43□□□□□ -0.1
Ebf4Q8K4J2 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ebf4Q8K4J2 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ebf4Q8K4J2 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ebf4Q8K4J2 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.42□□□□□ -0.1
Ebf4Q8K4J2 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ebf4Q8K4J2 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ebf4Q8K4J2 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ebf4Q8K4J2 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.42□□□□□ -0.1
Ebf4Q8K4J2 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.42□□□□□ -0.1
Ebf4Q8K4J2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ebf4Q8K4J2 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ebf4Q8K4J2 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ebf4Q8K4J2 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ebf4Q8K4J2 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.42□□□□□ -0.1
Ebf4Q8K4J2 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ebf4Q8K4J2 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ebf4Q8K4J2 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ebf4Q8K4J2 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ebf4Q8K4J2 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.42□□□□□ -0.1
Ebf4Q8K4J2 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ebf4Q8K4J2 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.42□□□□□ -0.1
Ebf4Q8K4J2 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Ebf4Q8K4J2 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Ebf4Q8K4J2 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ebf4Q8K4J2 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ebf4Q8K4J2 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ebf4Q8K4J2 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ebf4Q8K4J2 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Ebf4Q8K4J2 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ebf4Q8K4J2 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ebf4Q8K4J2 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ebf4Q8K4J2 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ebf4Q8K4J2 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ebf4Q8K4J2 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ebf4Q8K4J2 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ebf4Q8K4J2 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.41□□□□□ -0.1
Ebf4Q8K4J2 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.41□□□□□ -0.1
Ebf4Q8K4J2 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ebf4Q8K4J2 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ebf4Q8K4J2 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ebf4Q8K4J2 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ebf4Q8K4J2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms