Protein–RNA interactions for Protein: Q8K1J6

Trnt1, CCA tRNA nucleotidyltransferase 1, mitochondrial, mousemouse

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnt1Q8K1J6 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trnt1Q8K1J6 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trnt1Q8K1J6 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.3■□□□□ 0.04
Trnt1Q8K1J6 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trnt1Q8K1J6 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trnt1Q8K1J6 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trnt1Q8K1J6 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trnt1Q8K1J6 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trnt1Q8K1J6 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trnt1Q8K1J6 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trnt1Q8K1J6 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trnt1Q8K1J6 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.3■□□□□ 0.04
Trnt1Q8K1J6 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trnt1Q8K1J6 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Trnt1Q8K1J6 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trnt1Q8K1J6 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trnt1Q8K1J6 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trnt1Q8K1J6 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trnt1Q8K1J6 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trnt1Q8K1J6 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trnt1Q8K1J6 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trnt1Q8K1J6 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trnt1Q8K1J6 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trnt1Q8K1J6 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trnt1Q8K1J6 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trnt1Q8K1J6 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.29■□□□□ 0.04
Trnt1Q8K1J6 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.29■□□□□ 0.04
Trnt1Q8K1J6 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.29■□□□□ 0.04
Trnt1Q8K1J6 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trnt1Q8K1J6 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.29■□□□□ 0.04
Trnt1Q8K1J6 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Trnt1Q8K1J6 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Trnt1Q8K1J6 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Trnt1Q8K1J6 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.29■□□□□ 0.04
Trnt1Q8K1J6 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trnt1Q8K1J6 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trnt1Q8K1J6 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trnt1Q8K1J6 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trnt1Q8K1J6 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Trnt1Q8K1J6 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trnt1Q8K1J6 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trnt1Q8K1J6 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trnt1Q8K1J6 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trnt1Q8K1J6 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trnt1Q8K1J6 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trnt1Q8K1J6 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trnt1Q8K1J6 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trnt1Q8K1J6 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Trnt1Q8K1J6 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trnt1Q8K1J6 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trnt1Q8K1J6 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trnt1Q8K1J6 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trnt1Q8K1J6 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trnt1Q8K1J6 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trnt1Q8K1J6 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trnt1Q8K1J6 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trnt1Q8K1J6 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trnt1Q8K1J6 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.28■□□□□ 0.04
Trnt1Q8K1J6 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
Trnt1Q8K1J6 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.28■□□□□ 0.04
Trnt1Q8K1J6 Gm14859-201ENSMUST00000117752 357 ntBASIC15.28■□□□□ 0.04
Trnt1Q8K1J6 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trnt1Q8K1J6 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trnt1Q8K1J6 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trnt1Q8K1J6 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trnt1Q8K1J6 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trnt1Q8K1J6 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trnt1Q8K1J6 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trnt1Q8K1J6 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trnt1Q8K1J6 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.28■□□□□ 0.04
Trnt1Q8K1J6 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trnt1Q8K1J6 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trnt1Q8K1J6 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trnt1Q8K1J6 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trnt1Q8K1J6 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trnt1Q8K1J6 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trnt1Q8K1J6 Gm15372-201ENSMUST00000120729 834 ntBASIC15.27■□□□□ 0.04
Trnt1Q8K1J6 Gm9172-201ENSMUST00000212092 954 ntBASIC15.27■□□□□ 0.04
Trnt1Q8K1J6 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.27■□□□□ 0.04
Trnt1Q8K1J6 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.27■□□□□ 0.04
Trnt1Q8K1J6 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trnt1Q8K1J6 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trnt1Q8K1J6 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.27■□□□□ 0.04
Trnt1Q8K1J6 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trnt1Q8K1J6 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Trnt1Q8K1J6 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trnt1Q8K1J6 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trnt1Q8K1J6 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Trnt1Q8K1J6 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trnt1Q8K1J6 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trnt1Q8K1J6 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trnt1Q8K1J6 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.03
Trnt1Q8K1J6 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Trnt1Q8K1J6 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trnt1Q8K1J6 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trnt1Q8K1J6 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.26■□□□□ 0.03
Trnt1Q8K1J6 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trnt1Q8K1J6 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.26■□□□□ 0.03
Trnt1Q8K1J6 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trnt1Q8K1J6 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms