Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rdh1Q8CGV4 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rdh1Q8CGV4 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rdh1Q8CGV4 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
Rdh1Q8CGV4 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rdh1Q8CGV4 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rdh1Q8CGV4 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rdh1Q8CGV4 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.3■□□□□ 0.04
Rdh1Q8CGV4 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Rdh1Q8CGV4 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Rdh1Q8CGV4 Gm8000-201ENSMUST00000188378 592 ntBASIC15.3■□□□□ 0.04
Rdh1Q8CGV4 Gm37153-201ENSMUST00000193637 231 ntBASIC15.3■□□□□ 0.04
Rdh1Q8CGV4 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.3■□□□□ 0.04
Rdh1Q8CGV4 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.3■□□□□ 0.04
Rdh1Q8CGV4 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rdh1Q8CGV4 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.3■□□□□ 0.04
Rdh1Q8CGV4 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rdh1Q8CGV4 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rdh1Q8CGV4 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rdh1Q8CGV4 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rdh1Q8CGV4 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rdh1Q8CGV4 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rdh1Q8CGV4 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rdh1Q8CGV4 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rdh1Q8CGV4 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rdh1Q8CGV4 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rdh1Q8CGV4 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rdh1Q8CGV4 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rdh1Q8CGV4 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Rdh1Q8CGV4 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.29■□□□□ 0.04
Rdh1Q8CGV4 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rdh1Q8CGV4 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rdh1Q8CGV4 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rdh1Q8CGV4 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rdh1Q8CGV4 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rdh1Q8CGV4 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rdh1Q8CGV4 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rdh1Q8CGV4 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rdh1Q8CGV4 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rdh1Q8CGV4 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rdh1Q8CGV4 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rdh1Q8CGV4 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Rdh1Q8CGV4 Gm11779-201ENSMUST00000118541 368 ntBASIC15.29■□□□□ 0.04
Rdh1Q8CGV4 Gm12260-201ENSMUST00000122447 411 ntBASIC15.29■□□□□ 0.04
Rdh1Q8CGV4 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rdh1Q8CGV4 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.29■□□□□ 0.04
Rdh1Q8CGV4 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rdh1Q8CGV4 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rdh1Q8CGV4 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rdh1Q8CGV4 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rdh1Q8CGV4 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.29■□□□□ 0.04
Rdh1Q8CGV4 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Rdh1Q8CGV4 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rdh1Q8CGV4 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rdh1Q8CGV4 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rdh1Q8CGV4 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rdh1Q8CGV4 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rdh1Q8CGV4 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rdh1Q8CGV4 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rdh1Q8CGV4 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rdh1Q8CGV4 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rdh1Q8CGV4 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rdh1Q8CGV4 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rdh1Q8CGV4 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rdh1Q8CGV4 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rdh1Q8CGV4 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.28■□□□□ 0.04
Rdh1Q8CGV4 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rdh1Q8CGV4 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rdh1Q8CGV4 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rdh1Q8CGV4 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.28■□□□□ 0.04
Rdh1Q8CGV4 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rdh1Q8CGV4 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rdh1Q8CGV4 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rdh1Q8CGV4 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rdh1Q8CGV4 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.28■□□□□ 0.04
Rdh1Q8CGV4 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rdh1Q8CGV4 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Rdh1Q8CGV4 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rdh1Q8CGV4 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Rdh1Q8CGV4 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rdh1Q8CGV4 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rdh1Q8CGV4 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rdh1Q8CGV4 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rdh1Q8CGV4 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.27■□□□□ 0.04
Rdh1Q8CGV4 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Rdh1Q8CGV4 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rdh1Q8CGV4 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rdh1Q8CGV4 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rdh1Q8CGV4 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rdh1Q8CGV4 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rdh1Q8CGV4 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rdh1Q8CGV4 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rdh1Q8CGV4 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rdh1Q8CGV4 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rdh1Q8CGV4 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rdh1Q8CGV4 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.27■□□□□ 0.04
Rdh1Q8CGV4 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.27■□□□□ 0.04
Rdh1Q8CGV4 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.27■□□□□ 0.04
Rdh1Q8CGV4 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.27■□□□□ 0.04
Rdh1Q8CGV4 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms