Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rbm28Q8CGC6 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
Rbm28Q8CGC6 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rbm28Q8CGC6 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rbm28Q8CGC6 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rbm28Q8CGC6 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.63■□□□□ 0.57
Rbm28Q8CGC6 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rbm28Q8CGC6 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rbm28Q8CGC6 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rbm28Q8CGC6 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rbm28Q8CGC6 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rbm28Q8CGC6 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rbm28Q8CGC6 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rbm28Q8CGC6 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rbm28Q8CGC6 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Rbm28Q8CGC6 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.63■□□□□ 0.57
Rbm28Q8CGC6 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rbm28Q8CGC6 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rbm28Q8CGC6 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rbm28Q8CGC6 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Rbm28Q8CGC6 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rbm28Q8CGC6 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.63■□□□□ 0.57
Rbm28Q8CGC6 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rbm28Q8CGC6 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rbm28Q8CGC6 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rbm28Q8CGC6 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Rbm28Q8CGC6 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rbm28Q8CGC6 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Rbm28Q8CGC6 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rbm28Q8CGC6 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rbm28Q8CGC6 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC18.62■□□□□ 0.57
Rbm28Q8CGC6 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC18.62■□□□□ 0.57
Rbm28Q8CGC6 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rbm28Q8CGC6 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.62■□□□□ 0.57
Rbm28Q8CGC6 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rbm28Q8CGC6 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rbm28Q8CGC6 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rbm28Q8CGC6 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rbm28Q8CGC6 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rbm28Q8CGC6 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rbm28Q8CGC6 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.62■□□□□ 0.57
Rbm28Q8CGC6 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rbm28Q8CGC6 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rbm28Q8CGC6 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rbm28Q8CGC6 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Rbm28Q8CGC6 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rbm28Q8CGC6 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rbm28Q8CGC6 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rbm28Q8CGC6 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rbm28Q8CGC6 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rbm28Q8CGC6 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rbm28Q8CGC6 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC18.61■□□□□ 0.57
Rbm28Q8CGC6 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.61■□□□□ 0.57
Rbm28Q8CGC6 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rbm28Q8CGC6 Gm6550-201ENSMUST00000187574 993 ntBASIC18.61■□□□□ 0.57
Rbm28Q8CGC6 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.61■□□□□ 0.57
Rbm28Q8CGC6 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rbm28Q8CGC6 AV026068-213ENSMUST00000223675 1171 ntBASIC18.61■□□□□ 0.57
Rbm28Q8CGC6 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Rbm28Q8CGC6 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Rbm28Q8CGC6 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rbm28Q8CGC6 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rbm28Q8CGC6 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rbm28Q8CGC6 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rbm28Q8CGC6 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rbm28Q8CGC6 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rbm28Q8CGC6 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rbm28Q8CGC6 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rbm28Q8CGC6 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rbm28Q8CGC6 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rbm28Q8CGC6 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC18.6■□□□□ 0.57
Rbm28Q8CGC6 Gm5364-201ENSMUST00000216789 889 ntBASIC18.6■□□□□ 0.57
Rbm28Q8CGC6 Gm5867-201ENSMUST00000063197 592 ntBASIC18.6■□□□□ 0.57
Rbm28Q8CGC6 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Rbm28Q8CGC6 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rbm28Q8CGC6 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rbm28Q8CGC6 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rbm28Q8CGC6 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Rbm28Q8CGC6 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rbm28Q8CGC6 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rbm28Q8CGC6 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rbm28Q8CGC6 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.6■□□□□ 0.57
Rbm28Q8CGC6 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rbm28Q8CGC6 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rbm28Q8CGC6 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rbm28Q8CGC6 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rbm28Q8CGC6 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rbm28Q8CGC6 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.59■□□□□ 0.57
Rbm28Q8CGC6 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rbm28Q8CGC6 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rbm28Q8CGC6 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rbm28Q8CGC6 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC18.59■□□□□ 0.57
Rbm28Q8CGC6 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.59■□□□□ 0.57
Rbm28Q8CGC6 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC18.59■□□□□ 0.57
Rbm28Q8CGC6 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.59■□□□□ 0.57
Rbm28Q8CGC6 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC18.59■□□□□ 0.57
Rbm28Q8CGC6 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rbm28Q8CGC6 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rbm28Q8CGC6 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rbm28Q8CGC6 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms