Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf31Q8CCF0 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf31Q8CCF0 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf31Q8CCF0 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf31Q8CCF0 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf31Q8CCF0 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.23■□□□□ 0.35
Prpf31Q8CCF0 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf31Q8CCF0 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.23■□□□□ 0.35
Prpf31Q8CCF0 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf31Q8CCF0 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.23■□□□□ 0.35
Prpf31Q8CCF0 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.23■□□□□ 0.35
Prpf31Q8CCF0 Gm18206-201ENSMUST00000207027 926 ntBASIC17.23■□□□□ 0.35
Prpf31Q8CCF0 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.23■□□□□ 0.35
Prpf31Q8CCF0 AV026068-213ENSMUST00000223675 1171 ntBASIC17.23■□□□□ 0.35
Prpf31Q8CCF0 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf31Q8CCF0 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf31Q8CCF0 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Prpf31Q8CCF0 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf31Q8CCF0 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.23■□□□□ 0.35
Prpf31Q8CCF0 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf31Q8CCF0 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf31Q8CCF0 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf31Q8CCF0 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf31Q8CCF0 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf31Q8CCF0 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Prpf31Q8CCF0 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf31Q8CCF0 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf31Q8CCF0 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf31Q8CCF0 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf31Q8CCF0 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf31Q8CCF0 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Prpf31Q8CCF0 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf31Q8CCF0 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf31Q8CCF0 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf31Q8CCF0 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.22■□□□□ 0.35
Prpf31Q8CCF0 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Prpf31Q8CCF0 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.22■□□□□ 0.35
Prpf31Q8CCF0 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.22■□□□□ 0.35
Prpf31Q8CCF0 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.22■□□□□ 0.35
Prpf31Q8CCF0 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf31Q8CCF0 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf31Q8CCF0 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Prpf31Q8CCF0 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Prpf31Q8CCF0 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf31Q8CCF0 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf31Q8CCF0 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.22■□□□□ 0.35
Prpf31Q8CCF0 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf31Q8CCF0 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf31Q8CCF0 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf31Q8CCF0 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Prpf31Q8CCF0 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Prpf31Q8CCF0 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf31Q8CCF0 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Prpf31Q8CCF0 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf31Q8CCF0 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf31Q8CCF0 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf31Q8CCF0 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf31Q8CCF0 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf31Q8CCF0 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf31Q8CCF0 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf31Q8CCF0 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf31Q8CCF0 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf31Q8CCF0 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf31Q8CCF0 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf31Q8CCF0 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf31Q8CCF0 Gm7222-201ENSMUST00000117512 906 ntBASIC17.21■□□□□ 0.35
Prpf31Q8CCF0 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Prpf31Q8CCF0 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.21■□□□□ 0.35
Prpf31Q8CCF0 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Prpf31Q8CCF0 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf31Q8CCF0 Gm27525-201ENSMUST00000184465 107 ntBASIC17.21■□□□□ 0.35
Prpf31Q8CCF0 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf31Q8CCF0 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf31Q8CCF0 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.21■□□□□ 0.35
Prpf31Q8CCF0 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf31Q8CCF0 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf31Q8CCF0 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf31Q8CCF0 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf31Q8CCF0 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf31Q8CCF0 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf31Q8CCF0 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.21■□□□□ 0.35
Prpf31Q8CCF0 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.21■□□□□ 0.34
Prpf31Q8CCF0 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Prpf31Q8CCF0 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Prpf31Q8CCF0 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.34
Prpf31Q8CCF0 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Prpf31Q8CCF0 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.2■□□□□ 0.34
Prpf31Q8CCF0 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf31Q8CCF0 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf31Q8CCF0 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf31Q8CCF0 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf31Q8CCF0 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf31Q8CCF0 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Prpf31Q8CCF0 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.2■□□□□ 0.34
Prpf31Q8CCF0 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.2■□□□□ 0.34
Prpf31Q8CCF0 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Prpf31Q8CCF0 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Prpf31Q8CCF0 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Prpf31Q8CCF0 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf31Q8CCF0 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms