Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd4Q8CC84 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd4Q8CC84 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd4Q8CC84 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd4Q8CC84 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd4Q8CC84 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd4Q8CC84 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd4Q8CC84 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd4Q8CC84 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd4Q8CC84 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd4Q8CC84 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd4Q8CC84 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd4Q8CC84 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd4Q8CC84 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Lysmd4Q8CC84 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.17□□□□□ -0.14
Lysmd4Q8CC84 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd4Q8CC84 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd4Q8CC84 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.17□□□□□ -0.14
Lysmd4Q8CC84 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd4Q8CC84 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Lysmd4Q8CC84 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd4Q8CC84 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd4Q8CC84 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Lysmd4Q8CC84 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd4Q8CC84 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.17□□□□□ -0.14
Lysmd4Q8CC84 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.17□□□□□ -0.14
Lysmd4Q8CC84 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd4Q8CC84 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd4Q8CC84 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd4Q8CC84 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd4Q8CC84 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd4Q8CC84 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.17□□□□□ -0.14
Lysmd4Q8CC84 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd4Q8CC84 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd4Q8CC84 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd4Q8CC84 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd4Q8CC84 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd4Q8CC84 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd4Q8CC84 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.16□□□□□ -0.14
Lysmd4Q8CC84 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd4Q8CC84 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd4Q8CC84 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Lysmd4Q8CC84 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd4Q8CC84 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd4Q8CC84 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd4Q8CC84 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd4Q8CC84 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.16□□□□□ -0.14
Lysmd4Q8CC84 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Lysmd4Q8CC84 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.16□□□□□ -0.14
Lysmd4Q8CC84 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd4Q8CC84 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.16□□□□□ -0.14
Lysmd4Q8CC84 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.16□□□□□ -0.14
Lysmd4Q8CC84 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Lysmd4Q8CC84 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.16□□□□□ -0.14
Lysmd4Q8CC84 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd4Q8CC84 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.16□□□□□ -0.14
Lysmd4Q8CC84 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.16□□□□□ -0.14
Lysmd4Q8CC84 Spcs1-207ENSMUST00000228767 1008 ntBASIC14.16□□□□□ -0.14
Lysmd4Q8CC84 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd4Q8CC84 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd4Q8CC84 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd4Q8CC84 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Lysmd4Q8CC84 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd4Q8CC84 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd4Q8CC84 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd4Q8CC84 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Lysmd4Q8CC84 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Lysmd4Q8CC84 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd4Q8CC84 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd4Q8CC84 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd4Q8CC84 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Lysmd4Q8CC84 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd4Q8CC84 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Lysmd4Q8CC84 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd4Q8CC84 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lysmd4Q8CC84 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Lysmd4Q8CC84 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Lysmd4Q8CC84 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lysmd4Q8CC84 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.15□□□□□ -0.14
Lysmd4Q8CC84 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lysmd4Q8CC84 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Lysmd4Q8CC84 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lysmd4Q8CC84 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lysmd4Q8CC84 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lysmd4Q8CC84 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lysmd4Q8CC84 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.15□□□□□ -0.14
Lysmd4Q8CC84 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lysmd4Q8CC84 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lysmd4Q8CC84 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lysmd4Q8CC84 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lysmd4Q8CC84 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lysmd4Q8CC84 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Lysmd4Q8CC84 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.15□□□□□ -0.14
Lysmd4Q8CC84 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lysmd4Q8CC84 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lysmd4Q8CC84 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.15□□□□□ -0.14
Lysmd4Q8CC84 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.15□□□□□ -0.14
Lysmd4Q8CC84 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.15□□□□□ -0.14
Lysmd4Q8CC84 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lysmd4Q8CC84 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms