Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SynpoQ8CC35 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SynpoQ8CC35 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.28■□□□□ 0.04
SynpoQ8CC35 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SynpoQ8CC35 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
SynpoQ8CC35 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.28■□□□□ 0.04
SynpoQ8CC35 Gm5864-201ENSMUST00000202263 970 ntBASIC15.28■□□□□ 0.04
SynpoQ8CC35 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SynpoQ8CC35 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SynpoQ8CC35 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SynpoQ8CC35 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SynpoQ8CC35 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SynpoQ8CC35 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SynpoQ8CC35 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SynpoQ8CC35 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SynpoQ8CC35 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
SynpoQ8CC35 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SynpoQ8CC35 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
SynpoQ8CC35 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SynpoQ8CC35 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
SynpoQ8CC35 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SynpoQ8CC35 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SynpoQ8CC35 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SynpoQ8CC35 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.27■□□□□ 0.04
SynpoQ8CC35 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SynpoQ8CC35 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.27■□□□□ 0.04
SynpoQ8CC35 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SynpoQ8CC35 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.27■□□□□ 0.04
SynpoQ8CC35 Gm13312-201ENSMUST00000119631 718 ntBASIC15.27■□□□□ 0.04
SynpoQ8CC35 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.27■□□□□ 0.04
SynpoQ8CC35 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.27■□□□□ 0.04
SynpoQ8CC35 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SynpoQ8CC35 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
SynpoQ8CC35 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SynpoQ8CC35 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SynpoQ8CC35 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SynpoQ8CC35 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SynpoQ8CC35 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.27■□□□□ 0.03
SynpoQ8CC35 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SynpoQ8CC35 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SynpoQ8CC35 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SynpoQ8CC35 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SynpoQ8CC35 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.26■□□□□ 0.03
SynpoQ8CC35 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.26■□□□□ 0.03
SynpoQ8CC35 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.26■□□□□ 0.03
SynpoQ8CC35 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SynpoQ8CC35 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.26■□□□□ 0.03
SynpoQ8CC35 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SynpoQ8CC35 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SynpoQ8CC35 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SynpoQ8CC35 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SynpoQ8CC35 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SynpoQ8CC35 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SynpoQ8CC35 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SynpoQ8CC35 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SynpoQ8CC35 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SynpoQ8CC35 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SynpoQ8CC35 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SynpoQ8CC35 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SynpoQ8CC35 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SynpoQ8CC35 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.26■□□□□ 0.03
SynpoQ8CC35 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.25■□□□□ 0.03
SynpoQ8CC35 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SynpoQ8CC35 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SynpoQ8CC35 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SynpoQ8CC35 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SynpoQ8CC35 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SynpoQ8CC35 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SynpoQ8CC35 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SynpoQ8CC35 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.25■□□□□ 0.03
SynpoQ8CC35 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SynpoQ8CC35 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SynpoQ8CC35 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SynpoQ8CC35 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.25■□□□□ 0.03
SynpoQ8CC35 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SynpoQ8CC35 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.25■□□□□ 0.03
SynpoQ8CC35 Gm44430-201ENSMUST00000203376 995 ntBASIC15.25■□□□□ 0.03
SynpoQ8CC35 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SynpoQ8CC35 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SynpoQ8CC35 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SynpoQ8CC35 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.25■□□□□ 0.03
SynpoQ8CC35 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SynpoQ8CC35 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SynpoQ8CC35 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
SynpoQ8CC35 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SynpoQ8CC35 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SynpoQ8CC35 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SynpoQ8CC35 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SynpoQ8CC35 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SynpoQ8CC35 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SynpoQ8CC35 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SynpoQ8CC35 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SynpoQ8CC35 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SynpoQ8CC35 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.24■□□□□ 0.03
SynpoQ8CC35 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SynpoQ8CC35 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SynpoQ8CC35 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
SynpoQ8CC35 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SynpoQ8CC35 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SynpoQ8CC35 Gm13884-201ENSMUST00000118103 829 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms