Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc46a2Q8CA03 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc46a2Q8CA03 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc46a2Q8CA03 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.19■□□□□ 0.02
Slc46a2Q8CA03 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Slc46a2Q8CA03 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc46a2Q8CA03 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Slc46a2Q8CA03 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.19■□□□□ 0.02
Slc46a2Q8CA03 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Slc46a2Q8CA03 Gm37055-201ENSMUST00000191866 133 ntBASIC15.19■□□□□ 0.02
Slc46a2Q8CA03 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.19■□□□□ 0.02
Slc46a2Q8CA03 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc46a2Q8CA03 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc46a2Q8CA03 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc46a2Q8CA03 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Slc46a2Q8CA03 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc46a2Q8CA03 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Slc46a2Q8CA03 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Slc46a2Q8CA03 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Slc46a2Q8CA03 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc46a2Q8CA03 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc46a2Q8CA03 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.18■□□□□ 0.02
Slc46a2Q8CA03 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc46a2Q8CA03 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Slc46a2Q8CA03 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc46a2Q8CA03 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc46a2Q8CA03 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Slc46a2Q8CA03 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc46a2Q8CA03 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc46a2Q8CA03 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc46a2Q8CA03 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc46a2Q8CA03 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.18■□□□□ 0.02
Slc46a2Q8CA03 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc46a2Q8CA03 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc46a2Q8CA03 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.18■□□□□ 0.02
Slc46a2Q8CA03 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.18■□□□□ 0.02
Slc46a2Q8CA03 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Slc46a2Q8CA03 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc46a2Q8CA03 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.18■□□□□ 0.02
Slc46a2Q8CA03 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc46a2Q8CA03 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Slc46a2Q8CA03 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc46a2Q8CA03 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc46a2Q8CA03 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc46a2Q8CA03 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc46a2Q8CA03 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc46a2Q8CA03 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc46a2Q8CA03 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc46a2Q8CA03 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc46a2Q8CA03 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc46a2Q8CA03 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc46a2Q8CA03 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc46a2Q8CA03 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc46a2Q8CA03 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.17■□□□□ 0.02
Slc46a2Q8CA03 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc46a2Q8CA03 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc46a2Q8CA03 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc46a2Q8CA03 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc46a2Q8CA03 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.17■□□□□ 0.02
Slc46a2Q8CA03 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc46a2Q8CA03 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Slc46a2Q8CA03 Gm16061-201ENSMUST00000122167 857 ntBASIC15.17■□□□□ 0.02
Slc46a2Q8CA03 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.17■□□□□ 0.02
Slc46a2Q8CA03 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc46a2Q8CA03 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Slc46a2Q8CA03 Gm7213-201ENSMUST00000215977 950 ntBASIC15.17■□□□□ 0.02
Slc46a2Q8CA03 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc46a2Q8CA03 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.17■□□□□ 0.02
Slc46a2Q8CA03 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Slc46a2Q8CA03 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Slc46a2Q8CA03 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc46a2Q8CA03 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc46a2Q8CA03 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc46a2Q8CA03 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Slc46a2Q8CA03 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc46a2Q8CA03 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc46a2Q8CA03 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc46a2Q8CA03 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Slc46a2Q8CA03 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Slc46a2Q8CA03 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc46a2Q8CA03 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc46a2Q8CA03 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Slc46a2Q8CA03 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.16■□□□□ 0.02
Slc46a2Q8CA03 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc46a2Q8CA03 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Slc46a2Q8CA03 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc46a2Q8CA03 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc46a2Q8CA03 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc46a2Q8CA03 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc46a2Q8CA03 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Slc46a2Q8CA03 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc46a2Q8CA03 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc46a2Q8CA03 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.16■□□□□ 0.02
Slc46a2Q8CA03 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Slc46a2Q8CA03 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15.16■□□□□ 0.02
Slc46a2Q8CA03 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Slc46a2Q8CA03 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Slc46a2Q8CA03 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.16■□□□□ 0.02
Slc46a2Q8CA03 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Slc46a2Q8CA03 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms