Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18.38■□□□□ 0.53
Alx1Q8C8B0 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Alx1Q8C8B0 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Alx1Q8C8B0 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Alx1Q8C8B0 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Alx1Q8C8B0 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Alx1Q8C8B0 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Alx1Q8C8B0 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.38■□□□□ 0.53
Alx1Q8C8B0 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Alx1Q8C8B0 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.38■□□□□ 0.53
Alx1Q8C8B0 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Alx1Q8C8B0 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Alx1Q8C8B0 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Alx1Q8C8B0 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.37■□□□□ 0.53
Alx1Q8C8B0 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Alx1Q8C8B0 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Alx1Q8C8B0 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Alx1Q8C8B0 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Alx1Q8C8B0 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.37■□□□□ 0.53
Alx1Q8C8B0 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Alx1Q8C8B0 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Alx1Q8C8B0 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Alx1Q8C8B0 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Alx1Q8C8B0 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18.37■□□□□ 0.53
Alx1Q8C8B0 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC18.37■□□□□ 0.53
Alx1Q8C8B0 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.37■□□□□ 0.53
Alx1Q8C8B0 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.37■□□□□ 0.53
Alx1Q8C8B0 AC160980.1-201ENSMUST00000224136 970 ntBASIC18.37■□□□□ 0.53
Alx1Q8C8B0 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Alx1Q8C8B0 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Alx1Q8C8B0 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Alx1Q8C8B0 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Alx1Q8C8B0 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.37■□□□□ 0.53
Alx1Q8C8B0 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Alx1Q8C8B0 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Alx1Q8C8B0 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Alx1Q8C8B0 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Alx1Q8C8B0 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Alx1Q8C8B0 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Alx1Q8C8B0 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Alx1Q8C8B0 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Alx1Q8C8B0 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Alx1Q8C8B0 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC18.36■□□□□ 0.53
Alx1Q8C8B0 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Alx1Q8C8B0 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Alx1Q8C8B0 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.36■□□□□ 0.53
Alx1Q8C8B0 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Alx1Q8C8B0 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.36■□□□□ 0.53
Alx1Q8C8B0 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Alx1Q8C8B0 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Alx1Q8C8B0 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Alx1Q8C8B0 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Alx1Q8C8B0 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Alx1Q8C8B0 Grk6-207ENSMUST00000225925 2769 ntBASIC18.36■□□□□ 0.53
Alx1Q8C8B0 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Alx1Q8C8B0 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Alx1Q8C8B0 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Alx1Q8C8B0 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Alx1Q8C8B0 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Alx1Q8C8B0 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Alx1Q8C8B0 Gm13036-201ENSMUST00000117799 748 ntBASIC18.35■□□□□ 0.53
Alx1Q8C8B0 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
Alx1Q8C8B0 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.35■□□□□ 0.53
Alx1Q8C8B0 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.35■□□□□ 0.53
Alx1Q8C8B0 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.35■□□□□ 0.53
Alx1Q8C8B0 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Alx1Q8C8B0 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Alx1Q8C8B0 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Alx1Q8C8B0 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Alx1Q8C8B0 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Alx1Q8C8B0 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC18.34■□□□□ 0.53
Alx1Q8C8B0 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Alx1Q8C8B0 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Alx1Q8C8B0 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.34■□□□□ 0.53
Alx1Q8C8B0 Gm37153-201ENSMUST00000193637 231 ntBASIC18.34■□□□□ 0.53
Alx1Q8C8B0 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.34■□□□□ 0.53
Alx1Q8C8B0 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Alx1Q8C8B0 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Alx1Q8C8B0 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Alx1Q8C8B0 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Alx1Q8C8B0 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18.34■□□□□ 0.53
Alx1Q8C8B0 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Alx1Q8C8B0 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Alx1Q8C8B0 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Alx1Q8C8B0 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Alx1Q8C8B0 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Alx1Q8C8B0 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Alx1Q8C8B0 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Alx1Q8C8B0 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Alx1Q8C8B0 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Alx1Q8C8B0 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Alx1Q8C8B0 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Alx1Q8C8B0 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Alx1Q8C8B0 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC18.33■□□□□ 0.53
Alx1Q8C8B0 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Alx1Q8C8B0 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Alx1Q8C8B0 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Alx1Q8C8B0 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Alx1Q8C8B0 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Alx1Q8C8B0 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms