Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc60Q8C4J0 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc60Q8C4J0 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc60Q8C4J0 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc60Q8C4J0 Gm42918-201ENSMUST00000199249 1580 ntBASIC20.12■□□□□ 0.81
Ccdc60Q8C4J0 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc60Q8C4J0 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc60Q8C4J0 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc60Q8C4J0 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc60Q8C4J0 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc60Q8C4J0 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Ccdc60Q8C4J0 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc60Q8C4J0 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc60Q8C4J0 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc60Q8C4J0 Prob1-201ENSMUST00000097619 3021 ntBASIC20.12■□□□□ 0.81
Ccdc60Q8C4J0 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc60Q8C4J0 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Ccdc60Q8C4J0 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc60Q8C4J0 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Ccdc60Q8C4J0 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc60Q8C4J0 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc60Q8C4J0 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc60Q8C4J0 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Ccdc60Q8C4J0 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc60Q8C4J0 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc60Q8C4J0 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC20.11■□□□□ 0.81
Ccdc60Q8C4J0 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
Ccdc60Q8C4J0 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc60Q8C4J0 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC20.11■□□□□ 0.81
Ccdc60Q8C4J0 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc60Q8C4J0 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC20.11■□□□□ 0.81
Ccdc60Q8C4J0 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC20.11■□□□□ 0.81
Ccdc60Q8C4J0 Gm8655-201ENSMUST00000221159 852 ntBASIC20.11■□□□□ 0.81
Ccdc60Q8C4J0 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc60Q8C4J0 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc60Q8C4J0 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Ccdc60Q8C4J0 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc60Q8C4J0 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc60Q8C4J0 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc60Q8C4J0 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc60Q8C4J0 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC20.1■□□□□ 0.81
Ccdc60Q8C4J0 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Ccdc60Q8C4J0 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc60Q8C4J0 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc60Q8C4J0 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc60Q8C4J0 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc60Q8C4J0 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc60Q8C4J0 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC20.1■□□□□ 0.81
Ccdc60Q8C4J0 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC20.1■□□□□ 0.81
Ccdc60Q8C4J0 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC20.1■□□□□ 0.81
Ccdc60Q8C4J0 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc60Q8C4J0 Rbfox2-207ENSMUST00000227533 1041 ntBASIC20.1■□□□□ 0.81
Ccdc60Q8C4J0 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc60Q8C4J0 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc60Q8C4J0 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Ccdc60Q8C4J0 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc60Q8C4J0 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Ccdc60Q8C4J0 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc60Q8C4J0 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC20.1■□□□□ 0.81
Ccdc60Q8C4J0 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Ccdc60Q8C4J0 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc60Q8C4J0 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc60Q8C4J0 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc60Q8C4J0 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Ccdc60Q8C4J0 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Ccdc60Q8C4J0 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc60Q8C4J0 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Ccdc60Q8C4J0 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc60Q8C4J0 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc60Q8C4J0 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Ccdc60Q8C4J0 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC20.09■□□□□ 0.81
Ccdc60Q8C4J0 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Ccdc60Q8C4J0 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC20.09■□□□□ 0.81
Ccdc60Q8C4J0 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc60Q8C4J0 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Ccdc60Q8C4J0 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc60Q8C4J0 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc60Q8C4J0 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc60Q8C4J0 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC20.09■□□□□ 0.81
Ccdc60Q8C4J0 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc60Q8C4J0 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc60Q8C4J0 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC20.09■□□□□ 0.81
Ccdc60Q8C4J0 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc60Q8C4J0 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc60Q8C4J0 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Ccdc60Q8C4J0 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc60Q8C4J0 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc60Q8C4J0 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc60Q8C4J0 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc60Q8C4J0 Gm5837-201ENSMUST00000191844 1369 ntBASIC20.08■□□□□ 0.81
Ccdc60Q8C4J0 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc60Q8C4J0 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc60Q8C4J0 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc60Q8C4J0 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc60Q8C4J0 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC20.08■□□□□ 0.81
Ccdc60Q8C4J0 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC20.08■□□□□ 0.81
Ccdc60Q8C4J0 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC20.08■□□□□ 0.81
Ccdc60Q8C4J0 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Ccdc60Q8C4J0 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ccdc60Q8C4J0 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms