Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Usp40Q8BWR4 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Usp40Q8BWR4 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Usp40Q8BWR4 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Usp40Q8BWR4 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Usp40Q8BWR4 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Usp40Q8BWR4 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC21.58■■□□□ 1.05
Usp40Q8BWR4 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Usp40Q8BWR4 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Usp40Q8BWR4 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Usp40Q8BWR4 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Usp40Q8BWR4 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Usp40Q8BWR4 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Usp40Q8BWR4 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Usp40Q8BWR4 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Usp40Q8BWR4 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Usp40Q8BWR4 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Usp40Q8BWR4 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Usp40Q8BWR4 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Usp40Q8BWR4 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
Usp40Q8BWR4 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Usp40Q8BWR4 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Usp40Q8BWR4 Chchd1-203ENSMUST00000224633 557 ntBASIC21.57■■□□□ 1.04
Usp40Q8BWR4 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Usp40Q8BWR4 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Usp40Q8BWR4 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Usp40Q8BWR4 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Usp40Q8BWR4 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Usp40Q8BWR4 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Usp40Q8BWR4 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Usp40Q8BWR4 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Usp40Q8BWR4 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Usp40Q8BWR4 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Usp40Q8BWR4 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC21.56■■□□□ 1.04
Usp40Q8BWR4 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Usp40Q8BWR4 Gm7286-201ENSMUST00000182691 1007 ntBASIC21.56■■□□□ 1.04
Usp40Q8BWR4 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC21.56■■□□□ 1.04
Usp40Q8BWR4 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Usp40Q8BWR4 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Usp40Q8BWR4 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Usp40Q8BWR4 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Usp40Q8BWR4 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Usp40Q8BWR4 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Usp40Q8BWR4 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Usp40Q8BWR4 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Usp40Q8BWR4 Prkcz2-201ENSMUST00000206136 1756 ntBASIC21.56■■□□□ 1.04
Usp40Q8BWR4 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Usp40Q8BWR4 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Usp40Q8BWR4 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Usp40Q8BWR4 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Usp40Q8BWR4 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
Usp40Q8BWR4 AC119177.1-201ENSMUST00000227647 1332 ntBASIC21.55■■□□□ 1.04
Usp40Q8BWR4 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Usp40Q8BWR4 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Usp40Q8BWR4 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Usp40Q8BWR4 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Usp40Q8BWR4 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC21.55■■□□□ 1.04
Usp40Q8BWR4 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC21.55■■□□□ 1.04
Usp40Q8BWR4 Gm26308-201ENSMUST00000157768 69 ntBASIC21.55■■□□□ 1.04
Usp40Q8BWR4 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Usp40Q8BWR4 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Usp40Q8BWR4 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Usp40Q8BWR4 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
Usp40Q8BWR4 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Usp40Q8BWR4 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Usp40Q8BWR4 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Usp40Q8BWR4 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Usp40Q8BWR4 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Usp40Q8BWR4 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Usp40Q8BWR4 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Usp40Q8BWR4 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Usp40Q8BWR4 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Usp40Q8BWR4 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC21.54■■□□□ 1.04
Usp40Q8BWR4 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Usp40Q8BWR4 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Usp40Q8BWR4 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Usp40Q8BWR4 Gm17271-201ENSMUST00000165535 355 ntBASIC21.54■■□□□ 1.04
Usp40Q8BWR4 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Usp40Q8BWR4 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC21.54■■□□□ 1.04
Usp40Q8BWR4 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Usp40Q8BWR4 Gm45747-201ENSMUST00000212203 999 ntBASIC21.54■■□□□ 1.04
Usp40Q8BWR4 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Usp40Q8BWR4 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Usp40Q8BWR4 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Usp40Q8BWR4 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Usp40Q8BWR4 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Usp40Q8BWR4 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Usp40Q8BWR4 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Usp40Q8BWR4 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Usp40Q8BWR4 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Usp40Q8BWR4 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Usp40Q8BWR4 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Usp40Q8BWR4 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Usp40Q8BWR4 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
Usp40Q8BWR4 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Usp40Q8BWR4 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Usp40Q8BWR4 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Usp40Q8BWR4 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Usp40Q8BWR4 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC21.53■■□□□ 1.04
Usp40Q8BWR4 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC21.53■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms