Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Cpne3Q8BT60 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpne3Q8BT60 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cpne3Q8BT60 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpne3Q8BT60 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpne3Q8BT60 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.28■□□□□ 0.04
Cpne3Q8BT60 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpne3Q8BT60 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpne3Q8BT60 Mir770-201ENSMUST00000103252 94 ntBASIC15.28■□□□□ 0.04
Cpne3Q8BT60 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpne3Q8BT60 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.28■□□□□ 0.04
Cpne3Q8BT60 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpne3Q8BT60 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cpne3Q8BT60 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cpne3Q8BT60 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpne3Q8BT60 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.28■□□□□ 0.04
Cpne3Q8BT60 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpne3Q8BT60 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cpne3Q8BT60 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Cpne3Q8BT60 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cpne3Q8BT60 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpne3Q8BT60 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpne3Q8BT60 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpne3Q8BT60 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpne3Q8BT60 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpne3Q8BT60 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cpne3Q8BT60 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpne3Q8BT60 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpne3Q8BT60 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpne3Q8BT60 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpne3Q8BT60 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Cpne3Q8BT60 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cpne3Q8BT60 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cpne3Q8BT60 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cpne3Q8BT60 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Cpne3Q8BT60 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cpne3Q8BT60 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Cpne3Q8BT60 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.27■□□□□ 0.04
Cpne3Q8BT60 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Cpne3Q8BT60 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cpne3Q8BT60 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.27■□□□□ 0.04
Cpne3Q8BT60 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cpne3Q8BT60 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.27■□□□□ 0.04
Cpne3Q8BT60 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cpne3Q8BT60 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cpne3Q8BT60 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.27■□□□□ 0.04
Cpne3Q8BT60 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cpne3Q8BT60 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cpne3Q8BT60 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.27■□□□□ 0.03
Cpne3Q8BT60 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.27■□□□□ 0.03
Cpne3Q8BT60 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cpne3Q8BT60 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cpne3Q8BT60 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.27■□□□□ 0.03
Cpne3Q8BT60 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cpne3Q8BT60 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cpne3Q8BT60 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Cpne3Q8BT60 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cpne3Q8BT60 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cpne3Q8BT60 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.27■□□□□ 0.03
Cpne3Q8BT60 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cpne3Q8BT60 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpne3Q8BT60 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpne3Q8BT60 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cpne3Q8BT60 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cpne3Q8BT60 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Cpne3Q8BT60 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpne3Q8BT60 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpne3Q8BT60 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cpne3Q8BT60 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cpne3Q8BT60 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cpne3Q8BT60 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpne3Q8BT60 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpne3Q8BT60 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cpne3Q8BT60 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cpne3Q8BT60 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpne3Q8BT60 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Cpne3Q8BT60 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cpne3Q8BT60 Gm44430-201ENSMUST00000203376 995 ntBASIC15.26■□□□□ 0.03
Cpne3Q8BT60 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpne3Q8BT60 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpne3Q8BT60 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpne3Q8BT60 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpne3Q8BT60 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpne3Q8BT60 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpne3Q8BT60 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.26■□□□□ 0.03
Cpne3Q8BT60 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Cpne3Q8BT60 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpne3Q8BT60 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpne3Q8BT60 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpne3Q8BT60 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.26■□□□□ 0.03
Cpne3Q8BT60 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpne3Q8BT60 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpne3Q8BT60 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpne3Q8BT60 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpne3Q8BT60 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cpne3Q8BT60 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpne3Q8BT60 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpne3Q8BT60 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpne3Q8BT60 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpne3Q8BT60 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms