Protein–RNA interactions for Protein: Q8BSQ9

Pbrm1, Protein polybromo-1, mousemouse

Known RBP Predictions only

Length 1,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pbrm1Q8BSQ9 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pbrm1Q8BSQ9 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pbrm1Q8BSQ9 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Pbrm1Q8BSQ9 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pbrm1Q8BSQ9 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pbrm1Q8BSQ9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC24.35■■□□□ 1.49
Pbrm1Q8BSQ9 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pbrm1Q8BSQ9 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC24.35■■□□□ 1.49
Pbrm1Q8BSQ9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pbrm1Q8BSQ9 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pbrm1Q8BSQ9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC24.35■■□□□ 1.49
Pbrm1Q8BSQ9 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Pbrm1Q8BSQ9 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC24.35■■□□□ 1.49
Pbrm1Q8BSQ9 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pbrm1Q8BSQ9 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC24.35■■□□□ 1.49
Pbrm1Q8BSQ9 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Pbrm1Q8BSQ9 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC24.35■■□□□ 1.49
Pbrm1Q8BSQ9 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pbrm1Q8BSQ9 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pbrm1Q8BSQ9 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC24.34■■□□□ 1.49
Pbrm1Q8BSQ9 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Pbrm1Q8BSQ9 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pbrm1Q8BSQ9 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Pbrm1Q8BSQ9 Gm24543-201ENSMUST00000103867 82 ntBASIC24.34■■□□□ 1.49
Pbrm1Q8BSQ9 Gm6539-201ENSMUST00000119157 1064 ntBASIC24.34■■□□□ 1.49
Pbrm1Q8BSQ9 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Pbrm1Q8BSQ9 Gm43703-201ENSMUST00000200523 763 ntBASIC24.34■■□□□ 1.49
Pbrm1Q8BSQ9 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pbrm1Q8BSQ9 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Pbrm1Q8BSQ9 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Pbrm1Q8BSQ9 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Pbrm1Q8BSQ9 Gm12138-201ENSMUST00000122180 951 ntBASIC24.33■■□□□ 1.49
Pbrm1Q8BSQ9 Gm29667-201ENSMUST00000190817 490 ntBASIC24.33■■□□□ 1.49
Pbrm1Q8BSQ9 Ighv5-13-201ENSMUST00000193550 290 ntBASIC24.33■■□□□ 1.49
Pbrm1Q8BSQ9 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
Pbrm1Q8BSQ9 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Pbrm1Q8BSQ9 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Pbrm1Q8BSQ9 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Pbrm1Q8BSQ9 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Pbrm1Q8BSQ9 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
Pbrm1Q8BSQ9 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
Pbrm1Q8BSQ9 Ighv8-7-201ENSMUST00000194349 297 ntBASIC24.32■■□□□ 1.48
Pbrm1Q8BSQ9 Grk6-207ENSMUST00000225925 2769 ntBASIC24.32■■□□□ 1.48
Pbrm1Q8BSQ9 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Pbrm1Q8BSQ9 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Pbrm1Q8BSQ9 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC24.32■■□□□ 1.48
Pbrm1Q8BSQ9 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC24.32■■□□□ 1.48
Pbrm1Q8BSQ9 Gm28631-201ENSMUST00000190740 334 ntBASIC24.32■■□□□ 1.48
Pbrm1Q8BSQ9 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC24.32■■□□□ 1.48
Pbrm1Q8BSQ9 Gm44719-201ENSMUST00000206404 149 ntBASIC24.32■■□□□ 1.48
Pbrm1Q8BSQ9 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pbrm1Q8BSQ9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pbrm1Q8BSQ9 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Pbrm1Q8BSQ9 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Pbrm1Q8BSQ9 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC24.31■■□□□ 1.48
Pbrm1Q8BSQ9 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pbrm1Q8BSQ9 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pbrm1Q8BSQ9 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pbrm1Q8BSQ9 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pbrm1Q8BSQ9 Gm14928-201ENSMUST00000120198 477 ntBASIC24.3■■□□□ 1.48
Pbrm1Q8BSQ9 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC24.3■■□□□ 1.48
Pbrm1Q8BSQ9 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC24.3■■□□□ 1.48
Pbrm1Q8BSQ9 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pbrm1Q8BSQ9 CT010506.4-201ENSMUST00000225457 351 ntBASIC24.3■■□□□ 1.48
Pbrm1Q8BSQ9 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pbrm1Q8BSQ9 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pbrm1Q8BSQ9 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pbrm1Q8BSQ9 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Pbrm1Q8BSQ9 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC24.3■■□□□ 1.48
Pbrm1Q8BSQ9 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pbrm1Q8BSQ9 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pbrm1Q8BSQ9 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Pbrm1Q8BSQ9 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pbrm1Q8BSQ9 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Pbrm1Q8BSQ9 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Pbrm1Q8BSQ9 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pbrm1Q8BSQ9 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
Pbrm1Q8BSQ9 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC24.29■■□□□ 1.48
Pbrm1Q8BSQ9 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC24.29■■□□□ 1.48
Pbrm1Q8BSQ9 Gm6218-201ENSMUST00000219812 628 ntBASIC24.29■■□□□ 1.48
Pbrm1Q8BSQ9 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pbrm1Q8BSQ9 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pbrm1Q8BSQ9 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pbrm1Q8BSQ9 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC24.29■■□□□ 1.48
Pbrm1Q8BSQ9 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pbrm1Q8BSQ9 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Pbrm1Q8BSQ9 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC24.28■■□□□ 1.48
Pbrm1Q8BSQ9 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Pbrm1Q8BSQ9 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
Pbrm1Q8BSQ9 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Pbrm1Q8BSQ9 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC24.28■■□□□ 1.48
Pbrm1Q8BSQ9 Gm6263-201ENSMUST00000120029 1342 ntBASIC24.28■■□□□ 1.48
Pbrm1Q8BSQ9 Gm42466-201ENSMUST00000202099 1301 ntBASIC24.28■■□□□ 1.48
Pbrm1Q8BSQ9 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Pbrm1Q8BSQ9 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Pbrm1Q8BSQ9 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Pbrm1Q8BSQ9 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
Pbrm1Q8BSQ9 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC24.28■■□□□ 1.48
Pbrm1Q8BSQ9 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Pbrm1Q8BSQ9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms