Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC20.55■□□□□ 0.88
Col16a1Q8BLX7 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC20.55■□□□□ 0.88
Col16a1Q8BLX7 Gm27618-201ENSMUST00000183671 60 ntBASIC20.55■□□□□ 0.88
Col16a1Q8BLX7 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col16a1Q8BLX7 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Col16a1Q8BLX7 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Col16a1Q8BLX7 AC130669.1-201ENSMUST00000228537 1672 ntBASIC20.54■□□□□ 0.88
Col16a1Q8BLX7 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col16a1Q8BLX7 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Col16a1Q8BLX7 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col16a1Q8BLX7 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC20.54■□□□□ 0.88
Col16a1Q8BLX7 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col16a1Q8BLX7 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC20.54■□□□□ 0.88
Col16a1Q8BLX7 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Col16a1Q8BLX7 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Col16a1Q8BLX7 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Col16a1Q8BLX7 Gm11424-201ENSMUST00000121929 829 ntBASIC20.54■□□□□ 0.88
Col16a1Q8BLX7 Gm27306-201ENSMUST00000183970 107 ntBASIC20.54■□□□□ 0.88
Col16a1Q8BLX7 Gm27430-201ENSMUST00000184585 107 ntBASIC20.54■□□□□ 0.88
Col16a1Q8BLX7 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC20.54■□□□□ 0.88
Col16a1Q8BLX7 Gm44333-201ENSMUST00000197168 107 ntBASIC20.54■□□□□ 0.88
Col16a1Q8BLX7 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Col16a1Q8BLX7 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col16a1Q8BLX7 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col16a1Q8BLX7 Gm26596-201ENSMUST00000180464 2655 ntBASIC20.53■□□□□ 0.88
Col16a1Q8BLX7 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col16a1Q8BLX7 AC159621.2-201ENSMUST00000223519 1326 ntBASIC20.53■□□□□ 0.88
Col16a1Q8BLX7 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col16a1Q8BLX7 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Col16a1Q8BLX7 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col16a1Q8BLX7 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col16a1Q8BLX7 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Col16a1Q8BLX7 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Col16a1Q8BLX7 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col16a1Q8BLX7 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col16a1Q8BLX7 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Col16a1Q8BLX7 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col16a1Q8BLX7 Gm5866-201ENSMUST00000177881 973 ntBASIC20.53■□□□□ 0.88
Col16a1Q8BLX7 Gm38294-201ENSMUST00000192831 381 ntBASIC20.53■□□□□ 0.88
Col16a1Q8BLX7 Gm2272-201ENSMUST00000194903 582 ntBASIC20.53■□□□□ 0.88
Col16a1Q8BLX7 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col16a1Q8BLX7 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col16a1Q8BLX7 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col16a1Q8BLX7 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Col16a1Q8BLX7 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Col16a1Q8BLX7 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col16a1Q8BLX7 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col16a1Q8BLX7 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col16a1Q8BLX7 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Col16a1Q8BLX7 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col16a1Q8BLX7 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col16a1Q8BLX7 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Col16a1Q8BLX7 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Col16a1Q8BLX7 Rbfox2-208ENSMUST00000227930 1218 ntBASIC20.52■□□□□ 0.88
Col16a1Q8BLX7 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col16a1Q8BLX7 Hist1h2al-201ENSMUST00000091708 339 ntBASIC20.52■□□□□ 0.88
Col16a1Q8BLX7 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC20.52■□□□□ 0.88
Col16a1Q8BLX7 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col16a1Q8BLX7 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC20.52■□□□□ 0.88
Col16a1Q8BLX7 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col16a1Q8BLX7 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col16a1Q8BLX7 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Col16a1Q8BLX7 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Col16a1Q8BLX7 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Col16a1Q8BLX7 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Col16a1Q8BLX7 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Col16a1Q8BLX7 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC20.51■□□□□ 0.87
Col16a1Q8BLX7 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Col16a1Q8BLX7 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col16a1Q8BLX7 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC20.51■□□□□ 0.87
Col16a1Q8BLX7 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Col16a1Q8BLX7 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC20.51■□□□□ 0.87
Col16a1Q8BLX7 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC20.51■□□□□ 0.87
Col16a1Q8BLX7 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC20.51■□□□□ 0.87
Col16a1Q8BLX7 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col16a1Q8BLX7 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col16a1Q8BLX7 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col16a1Q8BLX7 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col16a1Q8BLX7 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Col16a1Q8BLX7 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col16a1Q8BLX7 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC20.51■□□□□ 0.87
Col16a1Q8BLX7 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Col16a1Q8BLX7 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC20.51■□□□□ 0.87
Col16a1Q8BLX7 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC20.51■□□□□ 0.87
Col16a1Q8BLX7 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Col16a1Q8BLX7 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Col16a1Q8BLX7 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC20.51■□□□□ 0.87
Col16a1Q8BLX7 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC20.51■□□□□ 0.87
Col16a1Q8BLX7 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Col16a1Q8BLX7 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col16a1Q8BLX7 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Col16a1Q8BLX7 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col16a1Q8BLX7 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col16a1Q8BLX7 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
Col16a1Q8BLX7 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col16a1Q8BLX7 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col16a1Q8BLX7 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col16a1Q8BLX7 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Col16a1Q8BLX7 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col16a1Q8BLX7 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms