Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Pcdh20Q8BIZ0 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh20Q8BIZ0 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh20Q8BIZ0 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh20Q8BIZ0 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh20Q8BIZ0 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh20Q8BIZ0 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh20Q8BIZ0 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh20Q8BIZ0 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Pcdh20Q8BIZ0 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh20Q8BIZ0 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh20Q8BIZ0 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh20Q8BIZ0 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh20Q8BIZ0 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.44■□□□□ 0.06
Pcdh20Q8BIZ0 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh20Q8BIZ0 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh20Q8BIZ0 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh20Q8BIZ0 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh20Q8BIZ0 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh20Q8BIZ0 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh20Q8BIZ0 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh20Q8BIZ0 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh20Q8BIZ0 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh20Q8BIZ0 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh20Q8BIZ0 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh20Q8BIZ0 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh20Q8BIZ0 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh20Q8BIZ0 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh20Q8BIZ0 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh20Q8BIZ0 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Pcdh20Q8BIZ0 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh20Q8BIZ0 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.43■□□□□ 0.06
Pcdh20Q8BIZ0 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh20Q8BIZ0 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh20Q8BIZ0 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh20Q8BIZ0 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh20Q8BIZ0 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh20Q8BIZ0 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Pcdh20Q8BIZ0 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh20Q8BIZ0 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh20Q8BIZ0 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh20Q8BIZ0 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh20Q8BIZ0 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Pcdh20Q8BIZ0 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh20Q8BIZ0 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh20Q8BIZ0 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh20Q8BIZ0 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh20Q8BIZ0 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh20Q8BIZ0 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh20Q8BIZ0 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh20Q8BIZ0 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.42■□□□□ 0.06
Pcdh20Q8BIZ0 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh20Q8BIZ0 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
Pcdh20Q8BIZ0 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh20Q8BIZ0 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Pcdh20Q8BIZ0 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh20Q8BIZ0 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh20Q8BIZ0 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh20Q8BIZ0 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh20Q8BIZ0 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh20Q8BIZ0 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.42■□□□□ 0.06
Pcdh20Q8BIZ0 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Pcdh20Q8BIZ0 Ank2-226ENSMUST00000189368 339 ntBASIC15.42■□□□□ 0.06
Pcdh20Q8BIZ0 Gm18421-201ENSMUST00000204122 625 ntBASIC15.42■□□□□ 0.06
Pcdh20Q8BIZ0 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh20Q8BIZ0 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.42■□□□□ 0.06
Pcdh20Q8BIZ0 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh20Q8BIZ0 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh20Q8BIZ0 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh20Q8BIZ0 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh20Q8BIZ0 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh20Q8BIZ0 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.42■□□□□ 0.06
Pcdh20Q8BIZ0 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh20Q8BIZ0 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Pcdh20Q8BIZ0 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh20Q8BIZ0 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.42■□□□□ 0.06
Pcdh20Q8BIZ0 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh20Q8BIZ0 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh20Q8BIZ0 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh20Q8BIZ0 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh20Q8BIZ0 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh20Q8BIZ0 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh20Q8BIZ0 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh20Q8BIZ0 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh20Q8BIZ0 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Pcdh20Q8BIZ0 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.41■□□□□ 0.06
Pcdh20Q8BIZ0 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh20Q8BIZ0 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh20Q8BIZ0 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.41■□□□□ 0.06
Pcdh20Q8BIZ0 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh20Q8BIZ0 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
Pcdh20Q8BIZ0 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh20Q8BIZ0 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh20Q8BIZ0 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh20Q8BIZ0 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh20Q8BIZ0 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh20Q8BIZ0 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.41■□□□□ 0.06
Pcdh20Q8BIZ0 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.41■□□□□ 0.06
Pcdh20Q8BIZ0 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh20Q8BIZ0 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms