Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf38Q8BI21 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.27■□□□□ 0.04
Rnf38Q8BI21 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.27■□□□□ 0.04
Rnf38Q8BI21 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf38Q8BI21 Gm22697-201ENSMUST00000175194 63 ntBASIC15.27■□□□□ 0.04
Rnf38Q8BI21 Gm18101-201ENSMUST00000215769 548 ntBASIC15.27■□□□□ 0.04
Rnf38Q8BI21 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.27■□□□□ 0.04
Rnf38Q8BI21 Gm21559-201ENSMUST00000220638 855 ntBASIC15.27■□□□□ 0.04
Rnf38Q8BI21 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf38Q8BI21 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.27■□□□□ 0.04
Rnf38Q8BI21 Gm8587-201ENSMUST00000076538 843 ntBASIC15.27■□□□□ 0.04
Rnf38Q8BI21 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.27■□□□□ 0.03
Rnf38Q8BI21 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf38Q8BI21 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf38Q8BI21 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf38Q8BI21 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf38Q8BI21 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf38Q8BI21 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf38Q8BI21 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Rnf38Q8BI21 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf38Q8BI21 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf38Q8BI21 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Rnf38Q8BI21 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf38Q8BI21 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf38Q8BI21 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf38Q8BI21 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf38Q8BI21 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf38Q8BI21 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf38Q8BI21 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.26■□□□□ 0.03
Rnf38Q8BI21 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.26■□□□□ 0.03
Rnf38Q8BI21 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.26■□□□□ 0.03
Rnf38Q8BI21 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf38Q8BI21 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.26■□□□□ 0.03
Rnf38Q8BI21 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf38Q8BI21 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf38Q8BI21 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.26■□□□□ 0.03
Rnf38Q8BI21 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf38Q8BI21 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.26■□□□□ 0.03
Rnf38Q8BI21 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rnf38Q8BI21 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf38Q8BI21 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf38Q8BI21 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf38Q8BI21 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf38Q8BI21 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.25■□□□□ 0.03
Rnf38Q8BI21 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf38Q8BI21 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf38Q8BI21 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf38Q8BI21 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf38Q8BI21 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf38Q8BI21 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.25■□□□□ 0.03
Rnf38Q8BI21 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Rnf38Q8BI21 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf38Q8BI21 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf38Q8BI21 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.25■□□□□ 0.03
Rnf38Q8BI21 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.25■□□□□ 0.03
Rnf38Q8BI21 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf38Q8BI21 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.25■□□□□ 0.03
Rnf38Q8BI21 Gm27389-201ENSMUST00000183622 195 ntBASIC15.25■□□□□ 0.03
Rnf38Q8BI21 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Rnf38Q8BI21 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Rnf38Q8BI21 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf38Q8BI21 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf38Q8BI21 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf38Q8BI21 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.25■□□□□ 0.03
Rnf38Q8BI21 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf38Q8BI21 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf38Q8BI21 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf38Q8BI21 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Rnf38Q8BI21 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf38Q8BI21 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.24■□□□□ 0.03
Rnf38Q8BI21 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Rnf38Q8BI21 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf38Q8BI21 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf38Q8BI21 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf38Q8BI21 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf38Q8BI21 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf38Q8BI21 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf38Q8BI21 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.24■□□□□ 0.03
Rnf38Q8BI21 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.24■□□□□ 0.03
Rnf38Q8BI21 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Rnf38Q8BI21 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf38Q8BI21 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf38Q8BI21 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.24■□□□□ 0.03
Rnf38Q8BI21 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rnf38Q8BI21 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.24■□□□□ 0.03
Rnf38Q8BI21 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf38Q8BI21 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf38Q8BI21 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf38Q8BI21 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf38Q8BI21 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf38Q8BI21 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rnf38Q8BI21 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf38Q8BI21 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Rnf38Q8BI21 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Rnf38Q8BI21 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf38Q8BI21 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf38Q8BI21 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Rnf38Q8BI21 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf38Q8BI21 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.23■□□□□ 0.03
Rnf38Q8BI21 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms