Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Depdc1bQ8BH88 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Depdc1bQ8BH88 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.16■□□□□ 0.34
Depdc1bQ8BH88 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Depdc1bQ8BH88 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.16■□□□□ 0.34
Depdc1bQ8BH88 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Depdc1bQ8BH88 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Depdc1bQ8BH88 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.16■□□□□ 0.34
Depdc1bQ8BH88 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.16■□□□□ 0.34
Depdc1bQ8BH88 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Depdc1bQ8BH88 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Depdc1bQ8BH88 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Depdc1bQ8BH88 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Depdc1bQ8BH88 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.16■□□□□ 0.34
Depdc1bQ8BH88 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Depdc1bQ8BH88 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.16■□□□□ 0.34
Depdc1bQ8BH88 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Depdc1bQ8BH88 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Depdc1bQ8BH88 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Depdc1bQ8BH88 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Depdc1bQ8BH88 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Depdc1bQ8BH88 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Depdc1bQ8BH88 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Depdc1bQ8BH88 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Depdc1bQ8BH88 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.16■□□□□ 0.34
Depdc1bQ8BH88 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Depdc1bQ8BH88 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Depdc1bQ8BH88 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Depdc1bQ8BH88 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Depdc1bQ8BH88 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Depdc1bQ8BH88 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Depdc1bQ8BH88 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Depdc1bQ8BH88 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Depdc1bQ8BH88 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.15■□□□□ 0.34
Depdc1bQ8BH88 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Depdc1bQ8BH88 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Depdc1bQ8BH88 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Depdc1bQ8BH88 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Depdc1bQ8BH88 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Depdc1bQ8BH88 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Depdc1bQ8BH88 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Depdc1bQ8BH88 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Depdc1bQ8BH88 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Depdc1bQ8BH88 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Depdc1bQ8BH88 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Depdc1bQ8BH88 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Depdc1bQ8BH88 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Depdc1bQ8BH88 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Depdc1bQ8BH88 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Depdc1bQ8BH88 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Depdc1bQ8BH88 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.14■□□□□ 0.33
Depdc1bQ8BH88 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Depdc1bQ8BH88 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Depdc1bQ8BH88 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Depdc1bQ8BH88 Prob1-201ENSMUST00000097619 3021 ntBASIC17.14■□□□□ 0.33
Depdc1bQ8BH88 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Depdc1bQ8BH88 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.14■□□□□ 0.33
Depdc1bQ8BH88 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Depdc1bQ8BH88 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.14■□□□□ 0.33
Depdc1bQ8BH88 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Depdc1bQ8BH88 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Depdc1bQ8BH88 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Depdc1bQ8BH88 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Depdc1bQ8BH88 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Depdc1bQ8BH88 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Depdc1bQ8BH88 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Depdc1bQ8BH88 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Depdc1bQ8BH88 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Depdc1bQ8BH88 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Depdc1bQ8BH88 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.14■□□□□ 0.33
Depdc1bQ8BH88 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Depdc1bQ8BH88 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Depdc1bQ8BH88 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.14■□□□□ 0.33
Depdc1bQ8BH88 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Depdc1bQ8BH88 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Depdc1bQ8BH88 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Depdc1bQ8BH88 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Depdc1bQ8BH88 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Depdc1bQ8BH88 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Depdc1bQ8BH88 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.13■□□□□ 0.33
Depdc1bQ8BH88 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
Depdc1bQ8BH88 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.13■□□□□ 0.33
Depdc1bQ8BH88 Gm27459-201ENSMUST00000184860 107 ntBASIC17.13■□□□□ 0.33
Depdc1bQ8BH88 Gm28659-201ENSMUST00000188013 759 ntBASIC17.13■□□□□ 0.33
Depdc1bQ8BH88 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Depdc1bQ8BH88 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.13■□□□□ 0.33
Depdc1bQ8BH88 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Depdc1bQ8BH88 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.13■□□□□ 0.33
Depdc1bQ8BH88 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Depdc1bQ8BH88 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Depdc1bQ8BH88 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Depdc1bQ8BH88 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Depdc1bQ8BH88 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Depdc1bQ8BH88 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.13■□□□□ 0.33
Depdc1bQ8BH88 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Depdc1bQ8BH88 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Depdc1bQ8BH88 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Depdc1bQ8BH88 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Depdc1bQ8BH88 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Depdc1bQ8BH88 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms