Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc5a7Q8BGY9 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Slc5a7Q8BGY9 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc5a7Q8BGY9 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.88□□□□□ -0.19
Slc5a7Q8BGY9 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc5a7Q8BGY9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc5a7Q8BGY9 Gm44450-201ENSMUST00000199528 114 ntBASIC13.88□□□□□ -0.19
Slc5a7Q8BGY9 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.88□□□□□ -0.19
Slc5a7Q8BGY9 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc5a7Q8BGY9 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Slc5a7Q8BGY9 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc5a7Q8BGY9 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc5a7Q8BGY9 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Slc5a7Q8BGY9 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc5a7Q8BGY9 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.88□□□□□ -0.19
Slc5a7Q8BGY9 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc5a7Q8BGY9 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Slc5a7Q8BGY9 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Slc5a7Q8BGY9 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Slc5a7Q8BGY9 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Slc5a7Q8BGY9 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Slc5a7Q8BGY9 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Slc5a7Q8BGY9 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Slc5a7Q8BGY9 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Slc5a7Q8BGY9 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Slc5a7Q8BGY9 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Slc5a7Q8BGY9 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Slc5a7Q8BGY9 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Slc5a7Q8BGY9 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Slc5a7Q8BGY9 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Slc5a7Q8BGY9 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Slc5a7Q8BGY9 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Slc5a7Q8BGY9 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Slc5a7Q8BGY9 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Slc5a7Q8BGY9 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Slc5a7Q8BGY9 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Slc5a7Q8BGY9 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC13.87□□□□□ -0.19
Slc5a7Q8BGY9 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Slc5a7Q8BGY9 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Slc5a7Q8BGY9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Slc5a7Q8BGY9 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Slc5a7Q8BGY9 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Slc5a7Q8BGY9 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Slc5a7Q8BGY9 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Slc5a7Q8BGY9 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Slc5a7Q8BGY9 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Slc5a7Q8BGY9 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.87□□□□□ -0.19
Slc5a7Q8BGY9 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Slc5a7Q8BGY9 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Slc5a7Q8BGY9 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Slc5a7Q8BGY9 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Slc5a7Q8BGY9 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Slc5a7Q8BGY9 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Slc5a7Q8BGY9 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Slc5a7Q8BGY9 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Slc5a7Q8BGY9 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Slc5a7Q8BGY9 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Slc5a7Q8BGY9 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Slc5a7Q8BGY9 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.86□□□□□ -0.19
Slc5a7Q8BGY9 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Slc5a7Q8BGY9 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Slc5a7Q8BGY9 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.86□□□□□ -0.19
Slc5a7Q8BGY9 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Slc5a7Q8BGY9 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Slc5a7Q8BGY9 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Slc5a7Q8BGY9 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Slc5a7Q8BGY9 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Slc5a7Q8BGY9 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Slc5a7Q8BGY9 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Slc5a7Q8BGY9 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Slc5a7Q8BGY9 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Slc5a7Q8BGY9 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Slc5a7Q8BGY9 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Slc5a7Q8BGY9 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Slc5a7Q8BGY9 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Slc5a7Q8BGY9 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Slc5a7Q8BGY9 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Slc5a7Q8BGY9 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
Slc5a7Q8BGY9 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Slc5a7Q8BGY9 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Slc5a7Q8BGY9 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Slc5a7Q8BGY9 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Slc5a7Q8BGY9 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Slc5a7Q8BGY9 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Slc5a7Q8BGY9 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Slc5a7Q8BGY9 Gm7712-202ENSMUST00000222331 1510 ntBASIC13.85□□□□□ -0.19
Slc5a7Q8BGY9 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Slc5a7Q8BGY9 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Slc5a7Q8BGY9 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Slc5a7Q8BGY9 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Slc5a7Q8BGY9 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Slc5a7Q8BGY9 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Slc5a7Q8BGY9 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Slc5a7Q8BGY9 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC13.85□□□□□ -0.19
Slc5a7Q8BGY9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC13.85□□□□□ -0.19
Slc5a7Q8BGY9 Gm18421-201ENSMUST00000204122 625 ntBASIC13.85□□□□□ -0.19
Slc5a7Q8BGY9 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Slc5a7Q8BGY9 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Slc5a7Q8BGY9 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Slc5a7Q8BGY9 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms