Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trim6Q8BGE7 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.81■□□□□ 0.28
Trim6Q8BGE7 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim6Q8BGE7 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim6Q8BGE7 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim6Q8BGE7 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim6Q8BGE7 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim6Q8BGE7 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim6Q8BGE7 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim6Q8BGE7 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.8■□□□□ 0.28
Trim6Q8BGE7 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim6Q8BGE7 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim6Q8BGE7 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trim6Q8BGE7 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim6Q8BGE7 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim6Q8BGE7 Gm7213-201ENSMUST00000215977 950 ntBASIC16.8■□□□□ 0.28
Trim6Q8BGE7 Gm5417-201ENSMUST00000079706 384 ntBASIC16.8■□□□□ 0.28
Trim6Q8BGE7 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Trim6Q8BGE7 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trim6Q8BGE7 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.8■□□□□ 0.28
Trim6Q8BGE7 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim6Q8BGE7 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim6Q8BGE7 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim6Q8BGE7 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim6Q8BGE7 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim6Q8BGE7 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim6Q8BGE7 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim6Q8BGE7 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim6Q8BGE7 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim6Q8BGE7 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim6Q8BGE7 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim6Q8BGE7 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trim6Q8BGE7 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trim6Q8BGE7 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim6Q8BGE7 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim6Q8BGE7 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.79■□□□□ 0.28
Trim6Q8BGE7 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim6Q8BGE7 Gm22240-201ENSMUST00000175225 82 ntBASIC16.79■□□□□ 0.28
Trim6Q8BGE7 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.79■□□□□ 0.28
Trim6Q8BGE7 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim6Q8BGE7 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim6Q8BGE7 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim6Q8BGE7 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.79■□□□□ 0.28
Trim6Q8BGE7 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim6Q8BGE7 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim6Q8BGE7 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim6Q8BGE7 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim6Q8BGE7 Sybu-209ENSMUST00000228639 4113 ntBASIC16.79■□□□□ 0.28
Trim6Q8BGE7 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim6Q8BGE7 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim6Q8BGE7 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Trim6Q8BGE7 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trim6Q8BGE7 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim6Q8BGE7 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim6Q8BGE7 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim6Q8BGE7 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim6Q8BGE7 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim6Q8BGE7 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim6Q8BGE7 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim6Q8BGE7 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim6Q8BGE7 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim6Q8BGE7 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim6Q8BGE7 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.78■□□□□ 0.28
Trim6Q8BGE7 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Trim6Q8BGE7 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim6Q8BGE7 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim6Q8BGE7 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim6Q8BGE7 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim6Q8BGE7 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim6Q8BGE7 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim6Q8BGE7 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim6Q8BGE7 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim6Q8BGE7 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim6Q8BGE7 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim6Q8BGE7 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim6Q8BGE7 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim6Q8BGE7 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.77■□□□□ 0.28
Trim6Q8BGE7 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim6Q8BGE7 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim6Q8BGE7 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim6Q8BGE7 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Trim6Q8BGE7 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim6Q8BGE7 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.77■□□□□ 0.28
Trim6Q8BGE7 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.77■□□□□ 0.28
Trim6Q8BGE7 Gm30025-201ENSMUST00000218555 728 ntBASIC16.77■□□□□ 0.28
Trim6Q8BGE7 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim6Q8BGE7 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim6Q8BGE7 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim6Q8BGE7 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim6Q8BGE7 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.77■□□□□ 0.28
Trim6Q8BGE7 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Trim6Q8BGE7 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Trim6Q8BGE7 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trim6Q8BGE7 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.77■□□□□ 0.27
Trim6Q8BGE7 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim6Q8BGE7 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Trim6Q8BGE7 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trim6Q8BGE7 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Trim6Q8BGE7 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim6Q8BGE7 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms