Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf40bQ80W14 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Prpf40bQ80W14 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.19■□□□□ 0.5
Prpf40bQ80W14 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prpf40bQ80W14 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf40bQ80W14 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf40bQ80W14 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf40bQ80W14 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Prpf40bQ80W14 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf40bQ80W14 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf40bQ80W14 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf40bQ80W14 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf40bQ80W14 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf40bQ80W14 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf40bQ80W14 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.18■□□□□ 0.5
Prpf40bQ80W14 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.18■□□□□ 0.5
Prpf40bQ80W14 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.18■□□□□ 0.5
Prpf40bQ80W14 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf40bQ80W14 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf40bQ80W14 AC159114.1-201ENSMUST00000220349 266 ntBASIC18.18■□□□□ 0.5
Prpf40bQ80W14 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf40bQ80W14 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.18■□□□□ 0.5
Prpf40bQ80W14 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf40bQ80W14 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf40bQ80W14 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf40bQ80W14 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf40bQ80W14 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf40bQ80W14 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf40bQ80W14 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf40bQ80W14 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf40bQ80W14 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prpf40bQ80W14 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf40bQ80W14 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.17■□□□□ 0.5
Prpf40bQ80W14 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf40bQ80W14 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf40bQ80W14 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC18.17■□□□□ 0.5
Prpf40bQ80W14 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC18.17■□□□□ 0.5
Prpf40bQ80W14 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf40bQ80W14 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.17■□□□□ 0.5
Prpf40bQ80W14 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf40bQ80W14 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf40bQ80W14 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf40bQ80W14 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf40bQ80W14 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf40bQ80W14 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.17■□□□□ 0.5
Prpf40bQ80W14 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Prpf40bQ80W14 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf40bQ80W14 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf40bQ80W14 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prpf40bQ80W14 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Prpf40bQ80W14 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Prpf40bQ80W14 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf40bQ80W14 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf40bQ80W14 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf40bQ80W14 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf40bQ80W14 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf40bQ80W14 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Prpf40bQ80W14 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf40bQ80W14 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf40bQ80W14 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf40bQ80W14 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC18.16■□□□□ 0.5
Prpf40bQ80W14 Gm7222-201ENSMUST00000117512 906 ntBASIC18.16■□□□□ 0.5
Prpf40bQ80W14 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC18.16■□□□□ 0.5
Prpf40bQ80W14 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC18.16■□□□□ 0.5
Prpf40bQ80W14 Mir8117-201ENSMUST00000184773 107 ntBASIC18.16■□□□□ 0.5
Prpf40bQ80W14 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf40bQ80W14 AC174742.1-201ENSMUST00000218272 304 ntBASIC18.16■□□□□ 0.5
Prpf40bQ80W14 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf40bQ80W14 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf40bQ80W14 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf40bQ80W14 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf40bQ80W14 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf40bQ80W14 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Prpf40bQ80W14 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf40bQ80W14 Gm13127-201ENSMUST00000118978 1389 ntBASIC18.16■□□□□ 0.5
Prpf40bQ80W14 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf40bQ80W14 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf40bQ80W14 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prpf40bQ80W14 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Prpf40bQ80W14 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Prpf40bQ80W14 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf40bQ80W14 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf40bQ80W14 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf40bQ80W14 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Prpf40bQ80W14 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Prpf40bQ80W14 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Prpf40bQ80W14 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Prpf40bQ80W14 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf40bQ80W14 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf40bQ80W14 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf40bQ80W14 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.15■□□□□ 0.5
Prpf40bQ80W14 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.15■□□□□ 0.5
Prpf40bQ80W14 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf40bQ80W14 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC18.15■□□□□ 0.5
Prpf40bQ80W14 Gm44872-201ENSMUST00000207864 420 ntBASIC18.15■□□□□ 0.5
Prpf40bQ80W14 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC18.15■□□□□ 0.5
Prpf40bQ80W14 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf40bQ80W14 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf40bQ80W14 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf40bQ80W14 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms