Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim62Q80V85 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim62Q80V85 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim62Q80V85 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim62Q80V85 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trim62Q80V85 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim62Q80V85 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim62Q80V85 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim62Q80V85 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim62Q80V85 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim62Q80V85 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim62Q80V85 Gm25990-201ENSMUST00000102440 86 ntBASIC16.3■□□□□ 0.2
Trim62Q80V85 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.3■□□□□ 0.2
Trim62Q80V85 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.3■□□□□ 0.2
Trim62Q80V85 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trim62Q80V85 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim62Q80V85 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim62Q80V85 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Trim62Q80V85 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.3■□□□□ 0.2
Trim62Q80V85 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim62Q80V85 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim62Q80V85 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Trim62Q80V85 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim62Q80V85 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim62Q80V85 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim62Q80V85 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim62Q80V85 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim62Q80V85 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim62Q80V85 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim62Q80V85 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim62Q80V85 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Trim62Q80V85 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim62Q80V85 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim62Q80V85 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Trim62Q80V85 Gm7862-201ENSMUST00000121461 292 ntBASIC16.29■□□□□ 0.2
Trim62Q80V85 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Trim62Q80V85 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.29■□□□□ 0.2
Trim62Q80V85 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim62Q80V85 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Trim62Q80V85 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.29■□□□□ 0.2
Trim62Q80V85 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trim62Q80V85 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.29■□□□□ 0.2
Trim62Q80V85 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trim62Q80V85 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim62Q80V85 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim62Q80V85 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim62Q80V85 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim62Q80V85 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim62Q80V85 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim62Q80V85 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim62Q80V85 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim62Q80V85 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim62Q80V85 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim62Q80V85 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim62Q80V85 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trim62Q80V85 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim62Q80V85 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim62Q80V85 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim62Q80V85 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim62Q80V85 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim62Q80V85 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim62Q80V85 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim62Q80V85 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim62Q80V85 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim62Q80V85 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trim62Q80V85 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trim62Q80V85 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trim62Q80V85 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim62Q80V85 Gm13418-201ENSMUST00000119097 944 ntBASIC16.28■□□□□ 0.2
Trim62Q80V85 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.28■□□□□ 0.2
Trim62Q80V85 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim62Q80V85 Gm11780-201ENSMUST00000136880 516 ntBASIC16.28■□□□□ 0.2
Trim62Q80V85 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim62Q80V85 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.28■□□□□ 0.2
Trim62Q80V85 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim62Q80V85 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim62Q80V85 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim62Q80V85 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim62Q80V85 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim62Q80V85 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim62Q80V85 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim62Q80V85 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim62Q80V85 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.28■□□□□ 0.2
Trim62Q80V85 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim62Q80V85 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim62Q80V85 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim62Q80V85 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim62Q80V85 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim62Q80V85 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.28■□□□□ 0.2
Trim62Q80V85 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim62Q80V85 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim62Q80V85 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Trim62Q80V85 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim62Q80V85 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.27■□□□□ 0.2
Trim62Q80V85 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim62Q80V85 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim62Q80V85 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Trim62Q80V85 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim62Q80V85 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim62Q80V85 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms