Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC16.48■□□□□ 0.23
Prpf38bQ80SY5 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf38bQ80SY5 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf38bQ80SY5 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf38bQ80SY5 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf38bQ80SY5 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf38bQ80SY5 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf38bQ80SY5 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf38bQ80SY5 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Prpf38bQ80SY5 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf38bQ80SY5 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Prpf38bQ80SY5 Gm14701-201ENSMUST00000117156 348 ntBASIC16.47■□□□□ 0.23
Prpf38bQ80SY5 Gm13418-201ENSMUST00000119097 944 ntBASIC16.47■□□□□ 0.23
Prpf38bQ80SY5 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.47■□□□□ 0.23
Prpf38bQ80SY5 Mir3113-201ENSMUST00000175478 76 ntBASIC16.47■□□□□ 0.23
Prpf38bQ80SY5 Gm6550-201ENSMUST00000187574 993 ntBASIC16.47■□□□□ 0.23
Prpf38bQ80SY5 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.47■□□□□ 0.23
Prpf38bQ80SY5 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Prpf38bQ80SY5 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.47■□□□□ 0.23
Prpf38bQ80SY5 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf38bQ80SY5 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf38bQ80SY5 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.47■□□□□ 0.23
Prpf38bQ80SY5 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf38bQ80SY5 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf38bQ80SY5 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf38bQ80SY5 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf38bQ80SY5 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.47■□□□□ 0.23
Prpf38bQ80SY5 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf38bQ80SY5 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf38bQ80SY5 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf38bQ80SY5 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf38bQ80SY5 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Prpf38bQ80SY5 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf38bQ80SY5 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf38bQ80SY5 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf38bQ80SY5 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.46■□□□□ 0.23
Prpf38bQ80SY5 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf38bQ80SY5 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Prpf38bQ80SY5 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf38bQ80SY5 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf38bQ80SY5 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf38bQ80SY5 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf38bQ80SY5 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.46■□□□□ 0.23
Prpf38bQ80SY5 Gm13036-201ENSMUST00000117799 748 ntBASIC16.46■□□□□ 0.23
Prpf38bQ80SY5 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf38bQ80SY5 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf38bQ80SY5 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.46■□□□□ 0.23
Prpf38bQ80SY5 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.46■□□□□ 0.23
Prpf38bQ80SY5 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf38bQ80SY5 AC153937.1-201ENSMUST00000218734 412 ntBASIC16.46■□□□□ 0.23
Prpf38bQ80SY5 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.46■□□□□ 0.23
Prpf38bQ80SY5 Gm8396-201ENSMUST00000057361 823 ntBASIC16.46■□□□□ 0.23
Prpf38bQ80SY5 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf38bQ80SY5 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf38bQ80SY5 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf38bQ80SY5 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf38bQ80SY5 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prpf38bQ80SY5 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Prpf38bQ80SY5 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Prpf38bQ80SY5 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf38bQ80SY5 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
Prpf38bQ80SY5 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf38bQ80SY5 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Prpf38bQ80SY5 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf38bQ80SY5 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf38bQ80SY5 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf38bQ80SY5 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf38bQ80SY5 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf38bQ80SY5 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.45■□□□□ 0.22
Prpf38bQ80SY5 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf38bQ80SY5 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.45■□□□□ 0.22
Prpf38bQ80SY5 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Prpf38bQ80SY5 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf38bQ80SY5 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.45■□□□□ 0.22
Prpf38bQ80SY5 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf38bQ80SY5 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.45■□□□□ 0.22
Prpf38bQ80SY5 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Prpf38bQ80SY5 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf38bQ80SY5 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf38bQ80SY5 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf38bQ80SY5 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf38bQ80SY5 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf38bQ80SY5 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf38bQ80SY5 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Prpf38bQ80SY5 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf38bQ80SY5 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf38bQ80SY5 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf38bQ80SY5 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prpf38bQ80SY5 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.45■□□□□ 0.22
Prpf38bQ80SY5 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.45■□□□□ 0.22
Prpf38bQ80SY5 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Prpf38bQ80SY5 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf38bQ80SY5 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf38bQ80SY5 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf38bQ80SY5 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf38bQ80SY5 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf38bQ80SY5 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf38bQ80SY5 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf38bQ80SY5 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prpf38bQ80SY5 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms