Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pif1Q80SX8 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pif1Q80SX8 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pif1Q80SX8 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.54□□□□□ -0.08
Pif1Q80SX8 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pif1Q80SX8 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pif1Q80SX8 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.54□□□□□ -0.08
Pif1Q80SX8 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.54□□□□□ -0.08
Pif1Q80SX8 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.54□□□□□ -0.08
Pif1Q80SX8 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.54□□□□□ -0.08
Pif1Q80SX8 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.54□□□□□ -0.08
Pif1Q80SX8 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pif1Q80SX8 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pif1Q80SX8 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pif1Q80SX8 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Pif1Q80SX8 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pif1Q80SX8 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pif1Q80SX8 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pif1Q80SX8 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pif1Q80SX8 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.54□□□□□ -0.08
Pif1Q80SX8 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pif1Q80SX8 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pif1Q80SX8 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pif1Q80SX8 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Pif1Q80SX8 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pif1Q80SX8 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pif1Q80SX8 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pif1Q80SX8 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pif1Q80SX8 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pif1Q80SX8 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pif1Q80SX8 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pif1Q80SX8 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pif1Q80SX8 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.53□□□□□ -0.08
Pif1Q80SX8 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.53□□□□□ -0.08
Pif1Q80SX8 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pif1Q80SX8 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pif1Q80SX8 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Pif1Q80SX8 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pif1Q80SX8 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.53□□□□□ -0.08
Pif1Q80SX8 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pif1Q80SX8 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pif1Q80SX8 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.53□□□□□ -0.08
Pif1Q80SX8 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
Pif1Q80SX8 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.53□□□□□ -0.08
Pif1Q80SX8 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.53□□□□□ -0.08
Pif1Q80SX8 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pif1Q80SX8 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pif1Q80SX8 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pif1Q80SX8 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pif1Q80SX8 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.53□□□□□ -0.08
Pif1Q80SX8 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Pif1Q80SX8 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pif1Q80SX8 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pif1Q80SX8 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pif1Q80SX8 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
Pif1Q80SX8 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.52□□□□□ -0.09
Pif1Q80SX8 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.52□□□□□ -0.09
Pif1Q80SX8 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Pif1Q80SX8 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pif1Q80SX8 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pif1Q80SX8 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Pif1Q80SX8 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pif1Q80SX8 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pif1Q80SX8 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pif1Q80SX8 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pif1Q80SX8 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pif1Q80SX8 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pif1Q80SX8 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pif1Q80SX8 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pif1Q80SX8 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Pif1Q80SX8 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pif1Q80SX8 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Pif1Q80SX8 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pif1Q80SX8 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pif1Q80SX8 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pif1Q80SX8 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pif1Q80SX8 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pif1Q80SX8 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pif1Q80SX8 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pif1Q80SX8 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.51□□□□□ -0.09
Pif1Q80SX8 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pif1Q80SX8 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.51□□□□□ -0.09
Pif1Q80SX8 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.51□□□□□ -0.09
Pif1Q80SX8 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Pif1Q80SX8 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.51□□□□□ -0.09
Pif1Q80SX8 Gm27646-201ENSMUST00000183989 110 ntBASIC14.51□□□□□ -0.09
Pif1Q80SX8 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pif1Q80SX8 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.51□□□□□ -0.09
Pif1Q80SX8 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pif1Q80SX8 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.51□□□□□ -0.09
Pif1Q80SX8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pif1Q80SX8 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pif1Q80SX8 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pif1Q80SX8 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pif1Q80SX8 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pif1Q80SX8 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pif1Q80SX8 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pif1Q80SX8 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pif1Q80SX8 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pif1Q80SX8 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms