Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cspg5Q71M36 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cspg5Q71M36 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cspg5Q71M36 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cspg5Q71M36 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cspg5Q71M36 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cspg5Q71M36 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.36■□□□□ 0.21
Cspg5Q71M36 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cspg5Q71M36 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cspg5Q71M36 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cspg5Q71M36 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cspg5Q71M36 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cspg5Q71M36 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Cspg5Q71M36 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cspg5Q71M36 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cspg5Q71M36 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cspg5Q71M36 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cspg5Q71M36 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cspg5Q71M36 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cspg5Q71M36 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cspg5Q71M36 Gm8097-201ENSMUST00000117903 829 ntBASIC16.35■□□□□ 0.21
Cspg5Q71M36 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.35■□□□□ 0.21
Cspg5Q71M36 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cspg5Q71M36 Gm24513-201ENSMUST00000174964 138 ntBASIC16.35■□□□□ 0.21
Cspg5Q71M36 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cspg5Q71M36 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cspg5Q71M36 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.35■□□□□ 0.21
Cspg5Q71M36 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cspg5Q71M36 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cspg5Q71M36 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cspg5Q71M36 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cspg5Q71M36 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cspg5Q71M36 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Cspg5Q71M36 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cspg5Q71M36 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.35■□□□□ 0.21
Cspg5Q71M36 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cspg5Q71M36 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
Cspg5Q71M36 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cspg5Q71M36 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cspg5Q71M36 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.34■□□□□ 0.21
Cspg5Q71M36 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cspg5Q71M36 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cspg5Q71M36 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cspg5Q71M36 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cspg5Q71M36 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cspg5Q71M36 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cspg5Q71M36 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cspg5Q71M36 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cspg5Q71M36 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Cspg5Q71M36 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cspg5Q71M36 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cspg5Q71M36 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cspg5Q71M36 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.34■□□□□ 0.21
Cspg5Q71M36 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Cspg5Q71M36 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.34■□□□□ 0.21
Cspg5Q71M36 Gm6550-201ENSMUST00000187574 993 ntBASIC16.34■□□□□ 0.21
Cspg5Q71M36 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cspg5Q71M36 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cspg5Q71M36 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cspg5Q71M36 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cspg5Q71M36 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cspg5Q71M36 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Cspg5Q71M36 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.34■□□□□ 0.21
Cspg5Q71M36 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cspg5Q71M36 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cspg5Q71M36 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cspg5Q71M36 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cspg5Q71M36 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cspg5Q71M36 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cspg5Q71M36 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cspg5Q71M36 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cspg5Q71M36 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.33■□□□□ 0.2
Cspg5Q71M36 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cspg5Q71M36 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.33■□□□□ 0.2
Cspg5Q71M36 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cspg5Q71M36 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.33■□□□□ 0.2
Cspg5Q71M36 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cspg5Q71M36 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cspg5Q71M36 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Cspg5Q71M36 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cspg5Q71M36 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Cspg5Q71M36 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.33■□□□□ 0.2
Cspg5Q71M36 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cspg5Q71M36 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cspg5Q71M36 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cspg5Q71M36 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cspg5Q71M36 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.33■□□□□ 0.2
Cspg5Q71M36 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cspg5Q71M36 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.32■□□□□ 0.2
Cspg5Q71M36 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cspg5Q71M36 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Cspg5Q71M36 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cspg5Q71M36 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Cspg5Q71M36 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cspg5Q71M36 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cspg5Q71M36 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cspg5Q71M36 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Cspg5Q71M36 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cspg5Q71M36 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cspg5Q71M36 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms