Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx58Q6Q899 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx58Q6Q899 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx58Q6Q899 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx58Q6Q899 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx58Q6Q899 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx58Q6Q899 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC19.47■□□□□ 0.71
Ddx58Q6Q899 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx58Q6Q899 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC19.47■□□□□ 0.71
Ddx58Q6Q899 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC19.47■□□□□ 0.71
Ddx58Q6Q899 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx58Q6Q899 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Ddx58Q6Q899 Gm7787-201ENSMUST00000216858 688 ntBASIC19.47■□□□□ 0.71
Ddx58Q6Q899 AC090659.1-201ENSMUST00000224334 768 ntBASIC19.47■□□□□ 0.71
Ddx58Q6Q899 AC151836.1-202ENSMUST00000226259 753 ntBASIC19.47■□□□□ 0.71
Ddx58Q6Q899 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx58Q6Q899 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Ddx58Q6Q899 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.47■□□□□ 0.71
Ddx58Q6Q899 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
Ddx58Q6Q899 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Ddx58Q6Q899 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Ddx58Q6Q899 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx58Q6Q899 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx58Q6Q899 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx58Q6Q899 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx58Q6Q899 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx58Q6Q899 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx58Q6Q899 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx58Q6Q899 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx58Q6Q899 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Ddx58Q6Q899 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx58Q6Q899 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx58Q6Q899 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx58Q6Q899 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC19.46■□□□□ 0.71
Ddx58Q6Q899 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC19.46■□□□□ 0.71
Ddx58Q6Q899 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Ddx58Q6Q899 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx58Q6Q899 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC19.46■□□□□ 0.71
Ddx58Q6Q899 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx58Q6Q899 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx58Q6Q899 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC19.46■□□□□ 0.71
Ddx58Q6Q899 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx58Q6Q899 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Ddx58Q6Q899 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx58Q6Q899 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Ddx58Q6Q899 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Ddx58Q6Q899 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx58Q6Q899 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Ddx58Q6Q899 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx58Q6Q899 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Ddx58Q6Q899 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Ddx58Q6Q899 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC19.45■□□□□ 0.7
Ddx58Q6Q899 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx58Q6Q899 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC19.45■□□□□ 0.7
Ddx58Q6Q899 Gm27300-201ENSMUST00000184085 97 ntBASIC19.45■□□□□ 0.7
Ddx58Q6Q899 Gm27335-201ENSMUST00000184758 97 ntBASIC19.45■□□□□ 0.7
Ddx58Q6Q899 Gm2213-201ENSMUST00000197485 688 ntBASIC19.45■□□□□ 0.7
Ddx58Q6Q899 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx58Q6Q899 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx58Q6Q899 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx58Q6Q899 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx58Q6Q899 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.45■□□□□ 0.7
Ddx58Q6Q899 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx58Q6Q899 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Ddx58Q6Q899 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx58Q6Q899 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx58Q6Q899 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx58Q6Q899 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx58Q6Q899 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx58Q6Q899 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Ddx58Q6Q899 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx58Q6Q899 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Ddx58Q6Q899 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx58Q6Q899 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx58Q6Q899 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx58Q6Q899 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC19.44■□□□□ 0.7
Ddx58Q6Q899 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC19.44■□□□□ 0.7
Ddx58Q6Q899 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx58Q6Q899 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx58Q6Q899 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx58Q6Q899 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Ddx58Q6Q899 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Ddx58Q6Q899 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC19.44■□□□□ 0.7
Ddx58Q6Q899 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx58Q6Q899 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx58Q6Q899 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx58Q6Q899 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx58Q6Q899 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx58Q6Q899 Best4-ps-201ENSMUST00000129783 1380 ntBASIC19.44■□□□□ 0.7
Ddx58Q6Q899 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx58Q6Q899 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx58Q6Q899 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx58Q6Q899 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx58Q6Q899 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx58Q6Q899 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx58Q6Q899 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx58Q6Q899 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx58Q6Q899 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx58Q6Q899 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx58Q6Q899 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms