Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Dhx40Q6PE54 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Dhx40Q6PE54 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Dhx40Q6PE54 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Dhx40Q6PE54 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Dhx40Q6PE54 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.55■□□□□ 0.4
Dhx40Q6PE54 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Dhx40Q6PE54 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Dhx40Q6PE54 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Dhx40Q6PE54 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.55■□□□□ 0.4
Dhx40Q6PE54 Gm37722-201ENSMUST00000193757 208 ntBASIC17.55■□□□□ 0.4
Dhx40Q6PE54 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.55■□□□□ 0.4
Dhx40Q6PE54 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.55■□□□□ 0.4
Dhx40Q6PE54 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.55■□□□□ 0.4
Dhx40Q6PE54 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Dhx40Q6PE54 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Dhx40Q6PE54 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.55■□□□□ 0.4
Dhx40Q6PE54 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Dhx40Q6PE54 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Dhx40Q6PE54 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Dhx40Q6PE54 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Dhx40Q6PE54 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Dhx40Q6PE54 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.55■□□□□ 0.4
Dhx40Q6PE54 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Dhx40Q6PE54 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Dhx40Q6PE54 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Dhx40Q6PE54 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Dhx40Q6PE54 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Dhx40Q6PE54 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Dhx40Q6PE54 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Dhx40Q6PE54 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.54■□□□□ 0.4
Dhx40Q6PE54 Gm44430-201ENSMUST00000203376 995 ntBASIC17.54■□□□□ 0.4
Dhx40Q6PE54 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.54■□□□□ 0.4
Dhx40Q6PE54 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Dhx40Q6PE54 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Dhx40Q6PE54 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Dhx40Q6PE54 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Dhx40Q6PE54 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Dhx40Q6PE54 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Dhx40Q6PE54 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Dhx40Q6PE54 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Dhx40Q6PE54 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Dhx40Q6PE54 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Dhx40Q6PE54 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Dhx40Q6PE54 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Dhx40Q6PE54 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Dhx40Q6PE54 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Dhx40Q6PE54 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Dhx40Q6PE54 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.53■□□□□ 0.4
Dhx40Q6PE54 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Dhx40Q6PE54 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Dhx40Q6PE54 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Dhx40Q6PE54 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Dhx40Q6PE54 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Dhx40Q6PE54 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Dhx40Q6PE54 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
Dhx40Q6PE54 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Dhx40Q6PE54 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Dhx40Q6PE54 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Dhx40Q6PE54 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Dhx40Q6PE54 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Dhx40Q6PE54 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Dhx40Q6PE54 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Dhx40Q6PE54 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Dhx40Q6PE54 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Dhx40Q6PE54 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Dhx40Q6PE54 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Dhx40Q6PE54 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Dhx40Q6PE54 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Dhx40Q6PE54 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Dhx40Q6PE54 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Dhx40Q6PE54 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Dhx40Q6PE54 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.52■□□□□ 0.4
Dhx40Q6PE54 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Dhx40Q6PE54 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.52■□□□□ 0.4
Dhx40Q6PE54 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Dhx40Q6PE54 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Dhx40Q6PE54 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Dhx40Q6PE54 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Dhx40Q6PE54 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Dhx40Q6PE54 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.52■□□□□ 0.4
Dhx40Q6PE54 Mir6404-201ENSMUST00000183699 94 ntBASIC17.52■□□□□ 0.4
Dhx40Q6PE54 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.52■□□□□ 0.4
Dhx40Q6PE54 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.52■□□□□ 0.4
Dhx40Q6PE54 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Dhx40Q6PE54 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Dhx40Q6PE54 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
Dhx40Q6PE54 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.52■□□□□ 0.39
Dhx40Q6PE54 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Dhx40Q6PE54 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Dhx40Q6PE54 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.51■□□□□ 0.39
Dhx40Q6PE54 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.51■□□□□ 0.39
Dhx40Q6PE54 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Dhx40Q6PE54 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Dhx40Q6PE54 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Dhx40Q6PE54 Gm10052-201ENSMUST00000168019 960 ntBASIC17.51■□□□□ 0.39
Dhx40Q6PE54 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.51■□□□□ 0.39
Dhx40Q6PE54 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.51■□□□□ 0.39
Dhx40Q6PE54 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Dhx40Q6PE54 Gm7729-201ENSMUST00000050143 801 ntBASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms