Protein–RNA interactions for Protein: Q6PE13

Prrt3, Proline-rich transmembrane protein 3, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt3Q6PE13 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Prrt3Q6PE13 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prrt3Q6PE13 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prrt3Q6PE13 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Prrt3Q6PE13 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Prrt3Q6PE13 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prrt3Q6PE13 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prrt3Q6PE13 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prrt3Q6PE13 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Prrt3Q6PE13 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Prrt3Q6PE13 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
Prrt3Q6PE13 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prrt3Q6PE13 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prrt3Q6PE13 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prrt3Q6PE13 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prrt3Q6PE13 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prrt3Q6PE13 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.55■□□□□ 0.24
Prrt3Q6PE13 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prrt3Q6PE13 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Prrt3Q6PE13 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prrt3Q6PE13 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Prrt3Q6PE13 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.54■□□□□ 0.24
Prrt3Q6PE13 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Prrt3Q6PE13 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prrt3Q6PE13 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prrt3Q6PE13 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Prrt3Q6PE13 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prrt3Q6PE13 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.54■□□□□ 0.24
Prrt3Q6PE13 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Prrt3Q6PE13 Gm14913-201ENSMUST00000120011 1093 ntBASIC16.54■□□□□ 0.24
Prrt3Q6PE13 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.54■□□□□ 0.24
Prrt3Q6PE13 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.54■□□□□ 0.24
Prrt3Q6PE13 AC159246.1-201ENSMUST00000214478 249 ntBASIC16.54■□□□□ 0.24
Prrt3Q6PE13 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.54■□□□□ 0.24
Prrt3Q6PE13 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prrt3Q6PE13 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.54■□□□□ 0.24
Prrt3Q6PE13 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.54■□□□□ 0.24
Prrt3Q6PE13 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Prrt3Q6PE13 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prrt3Q6PE13 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prrt3Q6PE13 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prrt3Q6PE13 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prrt3Q6PE13 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prrt3Q6PE13 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prrt3Q6PE13 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Prrt3Q6PE13 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.53■□□□□ 0.24
Prrt3Q6PE13 Gm25925-201ENSMUST00000158314 306 ntBASIC16.53■□□□□ 0.24
Prrt3Q6PE13 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.53■□□□□ 0.24
Prrt3Q6PE13 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.53■□□□□ 0.24
Prrt3Q6PE13 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prrt3Q6PE13 Gm2213-201ENSMUST00000197485 688 ntBASIC16.53■□□□□ 0.24
Prrt3Q6PE13 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prrt3Q6PE13 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prrt3Q6PE13 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prrt3Q6PE13 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.53■□□□□ 0.24
Prrt3Q6PE13 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Prrt3Q6PE13 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prrt3Q6PE13 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prrt3Q6PE13 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Prrt3Q6PE13 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prrt3Q6PE13 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Prrt3Q6PE13 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.52■□□□□ 0.24
Prrt3Q6PE13 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prrt3Q6PE13 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prrt3Q6PE13 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Prrt3Q6PE13 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Prrt3Q6PE13 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prrt3Q6PE13 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Prrt3Q6PE13 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prrt3Q6PE13 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prrt3Q6PE13 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prrt3Q6PE13 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Prrt3Q6PE13 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prrt3Q6PE13 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Prrt3Q6PE13 Gm13263-201ENSMUST00000121271 838 ntBASIC16.52■□□□□ 0.24
Prrt3Q6PE13 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.52■□□□□ 0.24
Prrt3Q6PE13 Gm27702-201ENSMUST00000184512 56 ntBASIC16.52■□□□□ 0.24
Prrt3Q6PE13 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.52■□□□□ 0.24
Prrt3Q6PE13 Gm19324-201ENSMUST00000213229 1169 ntBASIC16.52■□□□□ 0.24
Prrt3Q6PE13 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.52■□□□□ 0.24
Prrt3Q6PE13 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Prrt3Q6PE13 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Prrt3Q6PE13 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Prrt3Q6PE13 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Prrt3Q6PE13 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Prrt3Q6PE13 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.52■□□□□ 0.23
Prrt3Q6PE13 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Prrt3Q6PE13 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
Prrt3Q6PE13 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Prrt3Q6PE13 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.51■□□□□ 0.23
Prrt3Q6PE13 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Prrt3Q6PE13 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prrt3Q6PE13 Grk6-207ENSMUST00000225925 2769 ntBASIC16.51■□□□□ 0.23
Prrt3Q6PE13 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prrt3Q6PE13 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prrt3Q6PE13 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Prrt3Q6PE13 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Prrt3Q6PE13 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prrt3Q6PE13 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.51■□□□□ 0.23
Prrt3Q6PE13 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms