Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Snrnp40Q6PE01 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.84□□□□□ -0.19
Snrnp40Q6PE01 Rprl2-201ENSMUST00000157150 290 ntBASIC13.84□□□□□ -0.19
Snrnp40Q6PE01 Gm25948-201ENSMUST00000175334 112 ntBASIC13.84□□□□□ -0.19
Snrnp40Q6PE01 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Snrnp40Q6PE01 Gm43474-201ENSMUST00000196415 774 ntBASIC13.84□□□□□ -0.19
Snrnp40Q6PE01 Thap2-203ENSMUST00000218989 527 ntBASIC13.84□□□□□ -0.19
Snrnp40Q6PE01 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.84□□□□□ -0.19
Snrnp40Q6PE01 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Snrnp40Q6PE01 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Snrnp40Q6PE01 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Snrnp40Q6PE01 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Snrnp40Q6PE01 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Snrnp40Q6PE01 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Snrnp40Q6PE01 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Snrnp40Q6PE01 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Snrnp40Q6PE01 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Snrnp40Q6PE01 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Snrnp40Q6PE01 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Snrnp40Q6PE01 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Snrnp40Q6PE01 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.19
Snrnp40Q6PE01 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.19
Snrnp40Q6PE01 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC13.83□□□□□ -0.19
Snrnp40Q6PE01 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Snrnp40Q6PE01 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Snrnp40Q6PE01 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Snrnp40Q6PE01 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Snrnp40Q6PE01 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Snrnp40Q6PE01 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Snrnp40Q6PE01 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Snrnp40Q6PE01 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Snrnp40Q6PE01 Mir7023-201ENSMUST00000185093 64 ntBASIC13.83□□□□□ -0.2
Snrnp40Q6PE01 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.83□□□□□ -0.2
Snrnp40Q6PE01 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.83□□□□□ -0.2
Snrnp40Q6PE01 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Snrnp40Q6PE01 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.83□□□□□ -0.2
Snrnp40Q6PE01 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.83□□□□□ -0.2
Snrnp40Q6PE01 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.83□□□□□ -0.2
Snrnp40Q6PE01 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Snrnp40Q6PE01 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Snrnp40Q6PE01 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Snrnp40Q6PE01 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Snrnp40Q6PE01 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Snrnp40Q6PE01 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Snrnp40Q6PE01 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Snrnp40Q6PE01 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Snrnp40Q6PE01 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Snrnp40Q6PE01 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Snrnp40Q6PE01 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Snrnp40Q6PE01 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.83□□□□□ -0.2
Snrnp40Q6PE01 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Snrnp40Q6PE01 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Snrnp40Q6PE01 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Snrnp40Q6PE01 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Snrnp40Q6PE01 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Snrnp40Q6PE01 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Snrnp40Q6PE01 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Snrnp40Q6PE01 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Snrnp40Q6PE01 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Snrnp40Q6PE01 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Snrnp40Q6PE01 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Snrnp40Q6PE01 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC13.82□□□□□ -0.2
Snrnp40Q6PE01 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Snrnp40Q6PE01 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Snrnp40Q6PE01 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Snrnp40Q6PE01 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Snrnp40Q6PE01 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Snrnp40Q6PE01 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Snrnp40Q6PE01 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Snrnp40Q6PE01 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Snrnp40Q6PE01 Gm18889-201ENSMUST00000174284 929 ntBASIC13.82□□□□□ -0.2
Snrnp40Q6PE01 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.82□□□□□ -0.2
Snrnp40Q6PE01 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Snrnp40Q6PE01 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Snrnp40Q6PE01 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Snrnp40Q6PE01 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Snrnp40Q6PE01 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Snrnp40Q6PE01 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Snrnp40Q6PE01 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.82□□□□□ -0.2
Snrnp40Q6PE01 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Snrnp40Q6PE01 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Snrnp40Q6PE01 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Snrnp40Q6PE01 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Snrnp40Q6PE01 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Snrnp40Q6PE01 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Snrnp40Q6PE01 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Snrnp40Q6PE01 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Snrnp40Q6PE01 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Snrnp40Q6PE01 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Snrnp40Q6PE01 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Snrnp40Q6PE01 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.81□□□□□ -0.2
Snrnp40Q6PE01 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Snrnp40Q6PE01 Gm20553-201ENSMUST00000204205 844 ntBASIC13.81□□□□□ -0.2
Snrnp40Q6PE01 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.81□□□□□ -0.2
Snrnp40Q6PE01 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.81□□□□□ -0.2
Snrnp40Q6PE01 Gm18246-201ENSMUST00000221023 728 ntBASIC13.81□□□□□ -0.2
Snrnp40Q6PE01 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Snrnp40Q6PE01 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Snrnp40Q6PE01 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Snrnp40Q6PE01 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms