Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chd4Q6PDQ2 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC20.42■□□□□ 0.86
Chd4Q6PDQ2 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chd4Q6PDQ2 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chd4Q6PDQ2 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Chd4Q6PDQ2 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chd4Q6PDQ2 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chd4Q6PDQ2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Chd4Q6PDQ2 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chd4Q6PDQ2 AA543401-201ENSMUST00000164248 1269 ntBASIC20.41■□□□□ 0.86
Chd4Q6PDQ2 CT025555.1-201ENSMUST00000225901 1217 ntBASIC20.41■□□□□ 0.86
Chd4Q6PDQ2 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chd4Q6PDQ2 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Chd4Q6PDQ2 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chd4Q6PDQ2 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Chd4Q6PDQ2 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Chd4Q6PDQ2 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chd4Q6PDQ2 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chd4Q6PDQ2 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chd4Q6PDQ2 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chd4Q6PDQ2 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Chd4Q6PDQ2 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chd4Q6PDQ2 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chd4Q6PDQ2 Mir449b-201ENSMUST00000104833 80 ntBASIC20.41■□□□□ 0.86
Chd4Q6PDQ2 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Chd4Q6PDQ2 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Chd4Q6PDQ2 AC140397.2-201ENSMUST00000224213 834 ntBASIC20.41■□□□□ 0.86
Chd4Q6PDQ2 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chd4Q6PDQ2 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Gm22065-201ENSMUST00000103753 110 ntBASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Gm22066-201ENSMUST00000103761 110 ntBASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Gm24932-201ENSMUST00000103763 110 ntBASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Gm24115-201ENSMUST00000103799 110 ntBASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Gm22190-201ENSMUST00000103827 110 ntBASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Gm22191-201ENSMUST00000103831 110 ntBASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Gm24721-201ENSMUST00000103849 110 ntBASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Gm28018-201ENSMUST00000103869 110 ntBASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Gm26399-201ENSMUST00000103937 110 ntBASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Gm25349-201ENSMUST00000177728 110 ntBASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Gm23616-201ENSMUST00000177797 110 ntBASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Gm25871-201ENSMUST00000177816 110 ntBASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Gm24752-201ENSMUST00000178240 110 ntBASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Gm24496-201ENSMUST00000178287 110 ntBASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Gm25649-201ENSMUST00000178476 110 ntBASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Gm25548-201ENSMUST00000178681 110 ntBASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Gm23147-201ENSMUST00000178841 110 ntBASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Gm26095-201ENSMUST00000179270 110 ntBASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Gm22171-201ENSMUST00000179283 110 ntBASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Gm23936-201ENSMUST00000179354 110 ntBASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Gm22619-201ENSMUST00000179516 110 ntBASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Gm25255-201ENSMUST00000179579 110 ntBASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Gm24755-201ENSMUST00000179691 110 ntBASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Gm26506-201ENSMUST00000179692 110 ntBASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Gm25086-201ENSMUST00000179931 110 ntBASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Gm23243-201ENSMUST00000180047 110 ntBASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Gm24659-201ENSMUST00000180212 110 ntBASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Gm24169-201ENSMUST00000180244 110 ntBASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Gm23689-201ENSMUST00000180354 110 ntBASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Gm27622-201ENSMUST00000183779 60 ntBASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Gm27359-201ENSMUST00000184153 110 ntBASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Gm27785-201ENSMUST00000184268 110 ntBASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Gm27466-201ENSMUST00000184396 110 ntBASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Gm27703-201ENSMUST00000184836 110 ntBASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Rbfox2-208ENSMUST00000227930 1218 ntBASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Gm7901-201ENSMUST00000120430 1597 ntBASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chd4Q6PDQ2 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Chd4Q6PDQ2 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Chd4Q6PDQ2 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.86
Chd4Q6PDQ2 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Chd4Q6PDQ2 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Chd4Q6PDQ2 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
Chd4Q6PDQ2 Gm2272-201ENSMUST00000194903 582 ntBASIC20.39■□□□□ 0.86
Chd4Q6PDQ2 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Chd4Q6PDQ2 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC20.39■□□□□ 0.86
Chd4Q6PDQ2 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC20.39■□□□□ 0.86
Chd4Q6PDQ2 Wdyhv1-206ENSMUST00000227142 786 ntBASIC20.39■□□□□ 0.86
Chd4Q6PDQ2 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Chd4Q6PDQ2 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC20.39■□□□□ 0.85
Chd4Q6PDQ2 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Chd4Q6PDQ2 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Chd4Q6PDQ2 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Chd4Q6PDQ2 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Chd4Q6PDQ2 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC20.39■□□□□ 0.85
Chd4Q6PDQ2 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Chd4Q6PDQ2 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC20.39■□□□□ 0.85
Chd4Q6PDQ2 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms