Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.4■□□□□ 0.54
Smarcc2Q6PDG5 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.4■□□□□ 0.54
Smarcc2Q6PDG5 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.4■□□□□ 0.54
Smarcc2Q6PDG5 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcc2Q6PDG5 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Smarcc2Q6PDG5 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcc2Q6PDG5 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcc2Q6PDG5 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcc2Q6PDG5 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcc2Q6PDG5 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcc2Q6PDG5 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcc2Q6PDG5 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcc2Q6PDG5 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcc2Q6PDG5 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcc2Q6PDG5 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Smarcc2Q6PDG5 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Smarcc2Q6PDG5 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcc2Q6PDG5 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcc2Q6PDG5 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcc2Q6PDG5 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.4■□□□□ 0.54
Smarcc2Q6PDG5 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Smarcc2Q6PDG5 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Smarcc2Q6PDG5 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Smarcc2Q6PDG5 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Smarcc2Q6PDG5 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcc2Q6PDG5 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.39■□□□□ 0.53
Smarcc2Q6PDG5 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcc2Q6PDG5 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Smarcc2Q6PDG5 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcc2Q6PDG5 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcc2Q6PDG5 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC18.39■□□□□ 0.53
Smarcc2Q6PDG5 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.39■□□□□ 0.53
Smarcc2Q6PDG5 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcc2Q6PDG5 Birc2-201ENSMUST00000054878 378 ntBASIC18.39■□□□□ 0.53
Smarcc2Q6PDG5 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Smarcc2Q6PDG5 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcc2Q6PDG5 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcc2Q6PDG5 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Smarcc2Q6PDG5 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Smarcc2Q6PDG5 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcc2Q6PDG5 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcc2Q6PDG5 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcc2Q6PDG5 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcc2Q6PDG5 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcc2Q6PDG5 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcc2Q6PDG5 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcc2Q6PDG5 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcc2Q6PDG5 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC18.38■□□□□ 0.53
Smarcc2Q6PDG5 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcc2Q6PDG5 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcc2Q6PDG5 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcc2Q6PDG5 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcc2Q6PDG5 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcc2Q6PDG5 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC18.38■□□□□ 0.53
Smarcc2Q6PDG5 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
Smarcc2Q6PDG5 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcc2Q6PDG5 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcc2Q6PDG5 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcc2Q6PDG5 Gm15165-201ENSMUST00000118140 502 ntBASIC18.38■□□□□ 0.53
Smarcc2Q6PDG5 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.38■□□□□ 0.53
Smarcc2Q6PDG5 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcc2Q6PDG5 Gm6257-201ENSMUST00000163864 910 ntBASIC18.38■□□□□ 0.53
Smarcc2Q6PDG5 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.38■□□□□ 0.53
Smarcc2Q6PDG5 Gm27867-201ENSMUST00000184778 125 ntBASIC18.38■□□□□ 0.53
Smarcc2Q6PDG5 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcc2Q6PDG5 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.38■□□□□ 0.53
Smarcc2Q6PDG5 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcc2Q6PDG5 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcc2Q6PDG5 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcc2Q6PDG5 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.38■□□□□ 0.53
Smarcc2Q6PDG5 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcc2Q6PDG5 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Smarcc2Q6PDG5 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcc2Q6PDG5 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Smarcc2Q6PDG5 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Smarcc2Q6PDG5 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcc2Q6PDG5 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcc2Q6PDG5 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcc2Q6PDG5 Gm12644-201ENSMUST00000119935 606 ntBASIC18.37■□□□□ 0.53
Smarcc2Q6PDG5 Gm43347-201ENSMUST00000200226 580 ntBASIC18.37■□□□□ 0.53
Smarcc2Q6PDG5 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcc2Q6PDG5 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcc2Q6PDG5 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Smarcc2Q6PDG5 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcc2Q6PDG5 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcc2Q6PDG5 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Smarcc2Q6PDG5 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcc2Q6PDG5 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Smarcc2Q6PDG5 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcc2Q6PDG5 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcc2Q6PDG5 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Smarcc2Q6PDG5 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcc2Q6PDG5 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcc2Q6PDG5 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcc2Q6PDG5 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcc2Q6PDG5 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.36■□□□□ 0.53
Smarcc2Q6PDG5 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcc2Q6PDG5 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Smarcc2Q6PDG5 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcc2Q6PDG5 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms