Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.52□□□□□ -0.09
Smarcd3Q6P9Z1 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Smarcd3Q6P9Z1 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smarcd3Q6P9Z1 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smarcd3Q6P9Z1 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smarcd3Q6P9Z1 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smarcd3Q6P9Z1 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smarcd3Q6P9Z1 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smarcd3Q6P9Z1 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Smarcd3Q6P9Z1 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smarcd3Q6P9Z1 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smarcd3Q6P9Z1 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smarcd3Q6P9Z1 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcd3Q6P9Z1 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcd3Q6P9Z1 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcd3Q6P9Z1 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcd3Q6P9Z1 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcd3Q6P9Z1 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Smarcd3Q6P9Z1 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcd3Q6P9Z1 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcd3Q6P9Z1 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.51□□□□□ -0.09
Smarcd3Q6P9Z1 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.51□□□□□ -0.09
Smarcd3Q6P9Z1 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Smarcd3Q6P9Z1 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcd3Q6P9Z1 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.51□□□□□ -0.09
Smarcd3Q6P9Z1 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.51□□□□□ -0.09
Smarcd3Q6P9Z1 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
Smarcd3Q6P9Z1 Gm27389-201ENSMUST00000183622 195 ntBASIC14.51□□□□□ -0.09
Smarcd3Q6P9Z1 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Smarcd3Q6P9Z1 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.51□□□□□ -0.09
Smarcd3Q6P9Z1 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcd3Q6P9Z1 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcd3Q6P9Z1 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcd3Q6P9Z1 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Smarcd3Q6P9Z1 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcd3Q6P9Z1 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcd3Q6P9Z1 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Smarcd3Q6P9Z1 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcd3Q6P9Z1 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcd3Q6P9Z1 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcd3Q6P9Z1 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcd3Q6P9Z1 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.51□□□□□ -0.09
Smarcd3Q6P9Z1 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Smarcd3Q6P9Z1 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcd3Q6P9Z1 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcd3Q6P9Z1 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcd3Q6P9Z1 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smarcd3Q6P9Z1 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd3Q6P9Z1 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd3Q6P9Z1 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd3Q6P9Z1 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd3Q6P9Z1 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd3Q6P9Z1 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd3Q6P9Z1 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Smarcd3Q6P9Z1 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Smarcd3Q6P9Z1 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd3Q6P9Z1 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd3Q6P9Z1 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Smarcd3Q6P9Z1 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd3Q6P9Z1 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Smarcd3Q6P9Z1 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Smarcd3Q6P9Z1 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd3Q6P9Z1 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Smarcd3Q6P9Z1 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd3Q6P9Z1 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd3Q6P9Z1 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd3Q6P9Z1 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.5□□□□□ -0.09
Smarcd3Q6P9Z1 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd3Q6P9Z1 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Smarcd3Q6P9Z1 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd3Q6P9Z1 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Smarcd3Q6P9Z1 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd3Q6P9Z1 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd3Q6P9Z1 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd3Q6P9Z1 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Smarcd3Q6P9Z1 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd3Q6P9Z1 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd3Q6P9Z1 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd3Q6P9Z1 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd3Q6P9Z1 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
Smarcd3Q6P9Z1 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Smarcd3Q6P9Z1 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd3Q6P9Z1 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd3Q6P9Z1 Asic1-205ENSMUST00000228185 1818 ntBASIC14.5□□□□□ -0.09
Smarcd3Q6P9Z1 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd3Q6P9Z1 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smarcd3Q6P9Z1 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd3Q6P9Z1 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.49□□□□□ -0.09
Smarcd3Q6P9Z1 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd3Q6P9Z1 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd3Q6P9Z1 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd3Q6P9Z1 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd3Q6P9Z1 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd3Q6P9Z1 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Smarcd3Q6P9Z1 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.49□□□□□ -0.09
Smarcd3Q6P9Z1 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd3Q6P9Z1 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Smarcd3Q6P9Z1 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.49□□□□□ -0.09
Smarcd3Q6P9Z1 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.49□□□□□ -0.09
Smarcd3Q6P9Z1 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms