Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm4Q6IRU2 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm4Q6IRU2 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm4Q6IRU2 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm4Q6IRU2 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm4Q6IRU2 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm4Q6IRU2 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm4Q6IRU2 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm4Q6IRU2 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Tpm4Q6IRU2 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.68■□□□□ 0.42
Tpm4Q6IRU2 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.68■□□□□ 0.42
Tpm4Q6IRU2 Gm27389-201ENSMUST00000183622 195 ntBASIC17.68■□□□□ 0.42
Tpm4Q6IRU2 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.68■□□□□ 0.42
Tpm4Q6IRU2 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.68■□□□□ 0.42
Tpm4Q6IRU2 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm4Q6IRU2 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm4Q6IRU2 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Tpm4Q6IRU2 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm4Q6IRU2 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.68■□□□□ 0.42
Tpm4Q6IRU2 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm4Q6IRU2 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm4Q6IRU2 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tpm4Q6IRU2 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm4Q6IRU2 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC17.67■□□□□ 0.42
Tpm4Q6IRU2 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm4Q6IRU2 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm4Q6IRU2 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm4Q6IRU2 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm4Q6IRU2 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm4Q6IRU2 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm4Q6IRU2 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.67■□□□□ 0.42
Tpm4Q6IRU2 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm4Q6IRU2 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.67■□□□□ 0.42
Tpm4Q6IRU2 Gm45058-201ENSMUST00000205810 766 ntBASIC17.67■□□□□ 0.42
Tpm4Q6IRU2 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm4Q6IRU2 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm4Q6IRU2 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC17.67■□□□□ 0.42
Tpm4Q6IRU2 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Tpm4Q6IRU2 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm4Q6IRU2 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm4Q6IRU2 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm4Q6IRU2 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm4Q6IRU2 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm4Q6IRU2 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm4Q6IRU2 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.67■□□□□ 0.42
Tpm4Q6IRU2 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Tpm4Q6IRU2 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm4Q6IRU2 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Tpm4Q6IRU2 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm4Q6IRU2 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm4Q6IRU2 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Tpm4Q6IRU2 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Tpm4Q6IRU2 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Tpm4Q6IRU2 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Tpm4Q6IRU2 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.66■□□□□ 0.42
Tpm4Q6IRU2 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Tpm4Q6IRU2 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm4Q6IRU2 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm4Q6IRU2 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm4Q6IRU2 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm4Q6IRU2 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Tpm4Q6IRU2 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.66■□□□□ 0.42
Tpm4Q6IRU2 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm4Q6IRU2 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC17.66■□□□□ 0.42
Tpm4Q6IRU2 Sybu-209ENSMUST00000228639 4113 ntBASIC17.66■□□□□ 0.42
Tpm4Q6IRU2 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm4Q6IRU2 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm4Q6IRU2 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm4Q6IRU2 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm4Q6IRU2 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm4Q6IRU2 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm4Q6IRU2 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm4Q6IRU2 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Tpm4Q6IRU2 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm4Q6IRU2 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm4Q6IRU2 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm4Q6IRU2 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm4Q6IRU2 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Tpm4Q6IRU2 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC17.65■□□□□ 0.42
Tpm4Q6IRU2 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Tpm4Q6IRU2 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm4Q6IRU2 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.65■□□□□ 0.42
Tpm4Q6IRU2 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm4Q6IRU2 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.65■□□□□ 0.42
Tpm4Q6IRU2 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm4Q6IRU2 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Tpm4Q6IRU2 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm4Q6IRU2 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm4Q6IRU2 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm4Q6IRU2 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm4Q6IRU2 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm4Q6IRU2 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.65■□□□□ 0.42
Tpm4Q6IRU2 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm4Q6IRU2 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Tpm4Q6IRU2 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm4Q6IRU2 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm4Q6IRU2 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Tpm4Q6IRU2 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Tpm4Q6IRU2 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Tpm4Q6IRU2 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms