Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Clcn1Q64347 AC159295.1-201ENSMUST00000225326 940 ntBASIC19.92■□□□□ 0.78
Clcn1Q64347 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clcn1Q64347 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Clcn1Q64347 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clcn1Q64347 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Clcn1Q64347 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Clcn1Q64347 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clcn1Q64347 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clcn1Q64347 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clcn1Q64347 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clcn1Q64347 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clcn1Q64347 Gm14026-201ENSMUST00000120625 1789 ntBASIC19.91■□□□□ 0.78
Clcn1Q64347 Gm43598-201ENSMUST00000202482 2479 ntBASIC19.91■□□□□ 0.78
Clcn1Q64347 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clcn1Q64347 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clcn1Q64347 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC19.91■□□□□ 0.78
Clcn1Q64347 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC19.91■□□□□ 0.78
Clcn1Q64347 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clcn1Q64347 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Clcn1Q64347 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clcn1Q64347 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.91■□□□□ 0.78
Clcn1Q64347 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clcn1Q64347 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Clcn1Q64347 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Clcn1Q64347 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clcn1Q64347 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clcn1Q64347 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clcn1Q64347 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clcn1Q64347 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clcn1Q64347 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clcn1Q64347 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Clcn1Q64347 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clcn1Q64347 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clcn1Q64347 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clcn1Q64347 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clcn1Q64347 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clcn1Q64347 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clcn1Q64347 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.9■□□□□ 0.78
Clcn1Q64347 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clcn1Q64347 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clcn1Q64347 Gm14701-201ENSMUST00000117156 348 ntBASIC19.9■□□□□ 0.78
Clcn1Q64347 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clcn1Q64347 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Clcn1Q64347 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Clcn1Q64347 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC19.9■□□□□ 0.78
Clcn1Q64347 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC19.9■□□□□ 0.78
Clcn1Q64347 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clcn1Q64347 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clcn1Q64347 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clcn1Q64347 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Clcn1Q64347 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clcn1Q64347 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Clcn1Q64347 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Clcn1Q64347 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Clcn1Q64347 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.78
Clcn1Q64347 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clcn1Q64347 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clcn1Q64347 Gm7063-201ENSMUST00000186840 981 ntBASIC19.89■□□□□ 0.77
Clcn1Q64347 Gm5253-201ENSMUST00000187104 1025 ntBASIC19.89■□□□□ 0.77
Clcn1Q64347 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC19.89■□□□□ 0.77
Clcn1Q64347 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clcn1Q64347 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clcn1Q64347 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clcn1Q64347 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Clcn1Q64347 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clcn1Q64347 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Clcn1Q64347 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Clcn1Q64347 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Clcn1Q64347 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Clcn1Q64347 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Clcn1Q64347 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clcn1Q64347 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clcn1Q64347 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clcn1Q64347 Gm15358-201ENSMUST00000119249 520 ntBASIC19.88■□□□□ 0.77
Clcn1Q64347 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
Clcn1Q64347 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC19.88■□□□□ 0.77
Clcn1Q64347 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC19.88■□□□□ 0.77
Clcn1Q64347 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clcn1Q64347 Gm26917-202ENSMUST00000192833 3329 ntBASIC19.88■□□□□ 0.77
Clcn1Q64347 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clcn1Q64347 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
Clcn1Q64347 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clcn1Q64347 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clcn1Q64347 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Clcn1Q64347 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clcn1Q64347 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clcn1Q64347 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Clcn1Q64347 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clcn1Q64347 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Clcn1Q64347 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clcn1Q64347 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clcn1Q64347 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clcn1Q64347 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clcn1Q64347 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Clcn1Q64347 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC19.87■□□□□ 0.77
Clcn1Q64347 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clcn1Q64347 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC19.87■□□□□ 0.77
Clcn1Q64347 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC19.87■□□□□ 0.77
Clcn1Q64347 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms