Protein–RNA interactions for Protein: Q62249

Sox19, Protein SOX-19 (Fragment), mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox19Q62249 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox19Q62249 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Sox19Q62249 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox19Q62249 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox19Q62249 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox19Q62249 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox19Q62249 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
Sox19Q62249 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Sox19Q62249 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox19Q62249 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox19Q62249 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox19Q62249 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox19Q62249 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Sox19Q62249 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox19Q62249 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox19Q62249 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Sox19Q62249 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Sox19Q62249 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox19Q62249 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox19Q62249 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox19Q62249 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox19Q62249 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox19Q62249 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox19Q62249 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Sox19Q62249 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.49□□□□□ -0.25
Sox19Q62249 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox19Q62249 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox19Q62249 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.48□□□□□ -0.25
Sox19Q62249 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox19Q62249 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox19Q62249 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox19Q62249 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox19Q62249 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.48□□□□□ -0.25
Sox19Q62249 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox19Q62249 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox19Q62249 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Sox19Q62249 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.48□□□□□ -0.25
Sox19Q62249 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.48□□□□□ -0.25
Sox19Q62249 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox19Q62249 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox19Q62249 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Sox19Q62249 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox19Q62249 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC13.48□□□□□ -0.25
Sox19Q62249 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox19Q62249 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox19Q62249 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.48□□□□□ -0.25
Sox19Q62249 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox19Q62249 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox19Q62249 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.48□□□□□ -0.25
Sox19Q62249 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox19Q62249 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC13.48□□□□□ -0.25
Sox19Q62249 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC13.48□□□□□ -0.25
Sox19Q62249 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox19Q62249 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13.48□□□□□ -0.25
Sox19Q62249 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox19Q62249 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox19Q62249 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox19Q62249 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox19Q62249 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Sox19Q62249 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox19Q62249 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox19Q62249 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox19Q62249 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox19Q62249 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox19Q62249 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.47□□□□□ -0.25
Sox19Q62249 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox19Q62249 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox19Q62249 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Sox19Q62249 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
Sox19Q62249 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox19Q62249 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.47□□□□□ -0.25
Sox19Q62249 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sox19Q62249 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Sox19Q62249 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox19Q62249 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox19Q62249 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Sox19Q62249 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Sox19Q62249 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Sox19Q62249 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC13.47□□□□□ -0.25
Sox19Q62249 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.47□□□□□ -0.25
Sox19Q62249 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Sox19Q62249 Mir1199-201ENSMUST00000117015 119 ntBASIC13.47□□□□□ -0.25
Sox19Q62249 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC13.47□□□□□ -0.25
Sox19Q62249 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC13.47□□□□□ -0.25
Sox19Q62249 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox19Q62249 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox19Q62249 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox19Q62249 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox19Q62249 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox19Q62249 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Sox19Q62249 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Sox19Q62249 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
Sox19Q62249 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox19Q62249 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.47□□□□□ -0.25
Sox19Q62249 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sox19Q62249 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.47□□□□□ -0.25
Sox19Q62249 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox19Q62249 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.46□□□□□ -0.25
Sox19Q62249 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sox19Q62249 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms