Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.18■□□□□ 0.18
Six1Q62231 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Six1Q62231 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.18■□□□□ 0.18
Six1Q62231 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Six1Q62231 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Six1Q62231 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Six1Q62231 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Six1Q62231 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Six1Q62231 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Six1Q62231 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Six1Q62231 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Six1Q62231 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Six1Q62231 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.17■□□□□ 0.18
Six1Q62231 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Six1Q62231 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Six1Q62231 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Six1Q62231 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Six1Q62231 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Six1Q62231 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Six1Q62231 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Six1Q62231 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.17■□□□□ 0.18
Six1Q62231 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.17■□□□□ 0.18
Six1Q62231 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Six1Q62231 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Six1Q62231 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Six1Q62231 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Six1Q62231 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Six1Q62231 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Six1Q62231 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Six1Q62231 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Six1Q62231 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Six1Q62231 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Six1Q62231 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Six1Q62231 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Six1Q62231 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Six1Q62231 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Six1Q62231 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Six1Q62231 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Six1Q62231 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Six1Q62231 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Six1Q62231 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Six1Q62231 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Six1Q62231 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Six1Q62231 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Six1Q62231 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.16■□□□□ 0.18
Six1Q62231 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Six1Q62231 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Six1Q62231 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.16■□□□□ 0.18
Six1Q62231 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Six1Q62231 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Six1Q62231 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Six1Q62231 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Six1Q62231 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Six1Q62231 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.16■□□□□ 0.18
Six1Q62231 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Six1Q62231 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Six1Q62231 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.16■□□□□ 0.18
Six1Q62231 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Six1Q62231 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Six1Q62231 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Six1Q62231 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Six1Q62231 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Six1Q62231 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Six1Q62231 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Six1Q62231 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.15■□□□□ 0.18
Six1Q62231 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Six1Q62231 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Six1Q62231 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Six1Q62231 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Six1Q62231 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Six1Q62231 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Six1Q62231 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Six1Q62231 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Six1Q62231 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Six1Q62231 Gm13312-201ENSMUST00000119631 718 ntBASIC16.15■□□□□ 0.18
Six1Q62231 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.15■□□□□ 0.18
Six1Q62231 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Six1Q62231 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Six1Q62231 Gm29518-201ENSMUST00000190858 372 ntBASIC16.15■□□□□ 0.18
Six1Q62231 Gm17808-201ENSMUST00000200859 894 ntBASIC16.15■□□□□ 0.18
Six1Q62231 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Six1Q62231 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Six1Q62231 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Six1Q62231 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Six1Q62231 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.15■□□□□ 0.18
Six1Q62231 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.14■□□□□ 0.18
Six1Q62231 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Six1Q62231 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Six1Q62231 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Six1Q62231 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Six1Q62231 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Six1Q62231 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Six1Q62231 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Six1Q62231 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Six1Q62231 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.14■□□□□ 0.17
Six1Q62231 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Six1Q62231 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Six1Q62231 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Six1Q62231 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Six1Q62231 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms