Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn9aQ62205 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn9aQ62205 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn9aQ62205 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Scn9aQ62205 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC18.42■□□□□ 0.54
Scn9aQ62205 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn9aQ62205 Gm2272-201ENSMUST00000194903 582 ntBASIC18.42■□□□□ 0.54
Scn9aQ62205 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn9aQ62205 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Scn9aQ62205 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn9aQ62205 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn9aQ62205 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn9aQ62205 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn9aQ62205 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn9aQ62205 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn9aQ62205 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Scn9aQ62205 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn9aQ62205 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC18.42■□□□□ 0.54
Scn9aQ62205 Prkcz2-201ENSMUST00000206136 1756 ntBASIC18.42■□□□□ 0.54
Scn9aQ62205 AC025913.2-201ENSMUST00000220136 1766 ntBASIC18.42■□□□□ 0.54
Scn9aQ62205 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn9aQ62205 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Scn9aQ62205 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Scn9aQ62205 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Scn9aQ62205 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Scn9aQ62205 Gm11453-201ENSMUST00000117318 1007 ntBASIC18.42■□□□□ 0.54
Scn9aQ62205 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC18.42■□□□□ 0.54
Scn9aQ62205 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC18.42■□□□□ 0.54
Scn9aQ62205 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn9aQ62205 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn9aQ62205 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn9aQ62205 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn9aQ62205 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.41■□□□□ 0.54
Scn9aQ62205 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.41■□□□□ 0.54
Scn9aQ62205 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Scn9aQ62205 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn9aQ62205 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn9aQ62205 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn9aQ62205 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn9aQ62205 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Scn9aQ62205 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC18.41■□□□□ 0.54
Scn9aQ62205 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Scn9aQ62205 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn9aQ62205 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Scn9aQ62205 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn9aQ62205 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn9aQ62205 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Scn9aQ62205 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn9aQ62205 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Scn9aQ62205 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Scn9aQ62205 Gm12017-201ENSMUST00000122453 1003 ntBASIC18.41■□□□□ 0.54
Scn9aQ62205 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Scn9aQ62205 Gm17837-201ENSMUST00000186435 985 ntBASIC18.41■□□□□ 0.54
Scn9aQ62205 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC18.41■□□□□ 0.54
Scn9aQ62205 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn9aQ62205 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn9aQ62205 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn9aQ62205 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Scn9aQ62205 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn9aQ62205 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn9aQ62205 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn9aQ62205 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn9aQ62205 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Scn9aQ62205 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn9aQ62205 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.4■□□□□ 0.54
Scn9aQ62205 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Scn9aQ62205 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn9aQ62205 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn9aQ62205 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn9aQ62205 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn9aQ62205 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn9aQ62205 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Scn9aQ62205 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Scn9aQ62205 Gm6973-201ENSMUST00000117080 721 ntBASIC18.4■□□□□ 0.54
Scn9aQ62205 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Scn9aQ62205 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Scn9aQ62205 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Scn9aQ62205 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Scn9aQ62205 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC18.4■□□□□ 0.54
Scn9aQ62205 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn9aQ62205 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Scn9aQ62205 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Scn9aQ62205 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn9aQ62205 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn9aQ62205 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Scn9aQ62205 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn9aQ62205 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn9aQ62205 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn9aQ62205 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Scn9aQ62205 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Scn9aQ62205 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Scn9aQ62205 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Scn9aQ62205 Gm2810-201ENSMUST00000118681 990 ntBASIC18.39■□□□□ 0.53
Scn9aQ62205 Gm29541-201ENSMUST00000191351 678 ntBASIC18.39■□□□□ 0.53
Scn9aQ62205 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Scn9aQ62205 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC18.39■□□□□ 0.53
Scn9aQ62205 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn9aQ62205 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn9aQ62205 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Scn9aQ62205 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms