Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rai1Q61818 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.11■□□□□ 0.01
Rai1Q61818 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rai1Q61818 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.11■□□□□ 0.01
Rai1Q61818 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Rai1Q61818 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rai1Q61818 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Rai1Q61818 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Rai1Q61818 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rai1Q61818 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rai1Q61818 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rai1Q61818 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rai1Q61818 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rai1Q61818 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rai1Q61818 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rai1Q61818 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.11■□□□□ 0.01
Rai1Q61818 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rai1Q61818 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.1■□□□□ 0.01
Rai1Q61818 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Rai1Q61818 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rai1Q61818 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rai1Q61818 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.1■□□□□ 0.01
Rai1Q61818 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC15.1■□□□□ 0.01
Rai1Q61818 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.1■□□□□ 0.01
Rai1Q61818 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Rai1Q61818 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rai1Q61818 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.1■□□□□ 0.01
Rai1Q61818 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rai1Q61818 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.1■□□□□ 0.01
Rai1Q61818 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.1■□□□□ 0.01
Rai1Q61818 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rai1Q61818 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rai1Q61818 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rai1Q61818 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rai1Q61818 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rai1Q61818 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rai1Q61818 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rai1Q61818 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rai1Q61818 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rai1Q61818 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rai1Q61818 Mir449b-201ENSMUST00000104833 80 ntBASIC15.1■□□□□ 0.01
Rai1Q61818 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.1■□□□□ 0.01
Rai1Q61818 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.1■□□□□ 0.01
Rai1Q61818 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Rai1Q61818 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rai1Q61818 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.1■□□□□ 0.01
Rai1Q61818 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.1■□□□□ 0.01
Rai1Q61818 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.1■□□□□ 0.01
Rai1Q61818 Gm10154-201ENSMUST00000084445 354 ntBASIC15.1■□□□□ 0.01
Rai1Q61818 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rai1Q61818 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rai1Q61818 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rai1Q61818 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rai1Q61818 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rai1Q61818 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rai1Q61818 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Rai1Q61818 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rai1Q61818 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rai1Q61818 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rai1Q61818 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rai1Q61818 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rai1Q61818 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rai1Q61818 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.09■□□□□ 0.01
Rai1Q61818 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rai1Q61818 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.09■□□□□ 0.01
Rai1Q61818 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rai1Q61818 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.09■□□□□ 0.01
Rai1Q61818 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rai1Q61818 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rai1Q61818 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rai1Q61818 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Rai1Q61818 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rai1Q61818 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rai1Q61818 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rai1Q61818 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rai1Q61818 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Rai1Q61818 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Rai1Q61818 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Rai1Q61818 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC15.08■□□□□ 0.01
Rai1Q61818 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Rai1Q61818 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC15.08■□□□□ 0.01
Rai1Q61818 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Rai1Q61818 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.08■□□□□ 0.01
Rai1Q61818 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.08■□□□□ 0.01
Rai1Q61818 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rai1Q61818 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Rai1Q61818 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rai1Q61818 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rai1Q61818 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rai1Q61818 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rai1Q61818 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rai1Q61818 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.08■□□□□ 0
Rai1Q61818 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.08■□□□□ 0
Rai1Q61818 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Rai1Q61818 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
Rai1Q61818 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Rai1Q61818 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rai1Q61818 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.08■□□□□ 0
Rai1Q61818 Gm23547-201ENSMUST00000158210 271 ntBASIC15.08■□□□□ 0
Rai1Q61818 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms