Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gli3Q61602 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gli3Q61602 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC21.14■□□□□ 0.98
Gli3Q61602 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC21.14■□□□□ 0.98
Gli3Q61602 Gm15483-201ENSMUST00000120338 456 ntBASIC21.14■□□□□ 0.98
Gli3Q61602 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Gli3Q61602 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Gli3Q61602 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Gli3Q61602 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Gli3Q61602 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Gli3Q61602 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Gli3Q61602 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC21.14■□□□□ 0.98
Gli3Q61602 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Gli3Q61602 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC21.14■□□□□ 0.97
Gli3Q61602 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gli3Q61602 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Gli3Q61602 Gm27920-201ENSMUST00000183953 96 ntBASIC21.14■□□□□ 0.97
Gli3Q61602 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gli3Q61602 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC21.14■□□□□ 0.97
Gli3Q61602 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gli3Q61602 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gli3Q61602 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gli3Q61602 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gli3Q61602 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Gli3Q61602 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC21.13■□□□□ 0.97
Gli3Q61602 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Gli3Q61602 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC21.13■□□□□ 0.97
Gli3Q61602 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gli3Q61602 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
Gli3Q61602 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC21.13■□□□□ 0.97
Gli3Q61602 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gli3Q61602 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gli3Q61602 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Gli3Q61602 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC21.13■□□□□ 0.97
Gli3Q61602 Gm11918-201ENSMUST00000121660 179 ntBASIC21.12■□□□□ 0.97
Gli3Q61602 Gm8318-201ENSMUST00000182954 872 ntBASIC21.12■□□□□ 0.97
Gli3Q61602 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Gli3Q61602 Gm18624-201ENSMUST00000220966 658 ntBASIC21.12■□□□□ 0.97
Gli3Q61602 Gm5898-201ENSMUST00000121016 2071 ntBASIC21.12■□□□□ 0.97
Gli3Q61602 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gli3Q61602 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gli3Q61602 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gli3Q61602 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gli3Q61602 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gli3Q61602 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gli3Q61602 Mir1247-201ENSMUST00000116706 82 ntBASIC21.11■□□□□ 0.97
Gli3Q61602 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gli3Q61602 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gli3Q61602 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gli3Q61602 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Gli3Q61602 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Gli3Q61602 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gli3Q61602 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gli3Q61602 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Gli3Q61602 Gm24543-201ENSMUST00000103867 82 ntBASIC21.1■□□□□ 0.97
Gli3Q61602 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC21.1■□□□□ 0.97
Gli3Q61602 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Gli3Q61602 Gm10499-201ENSMUST00000174094 934 ntBASIC21.1■□□□□ 0.97
Gli3Q61602 Mir3547-201ENSMUST00000175461 88 ntBASIC21.1■□□□□ 0.97
Gli3Q61602 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Gli3Q61602 Gm5035-201ENSMUST00000215581 927 ntBASIC21.1■□□□□ 0.97
Gli3Q61602 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gli3Q61602 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gli3Q61602 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Gli3Q61602 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gli3Q61602 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gli3Q61602 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gli3Q61602 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
Gli3Q61602 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC21.1■□□□□ 0.97
Gli3Q61602 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Gli3Q61602 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gli3Q61602 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC21.1■□□□□ 0.97
Gli3Q61602 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC21.1■□□□□ 0.97
Gli3Q61602 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC21.09■□□□□ 0.97
Gli3Q61602 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC21.09■□□□□ 0.97
Gli3Q61602 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC21.09■□□□□ 0.97
Gli3Q61602 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gli3Q61602 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gli3Q61602 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gli3Q61602 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gli3Q61602 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
Gli3Q61602 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Gli3Q61602 Gm16026-204ENSMUST00000162652 683 ntBASIC21.09■□□□□ 0.97
Gli3Q61602 Gm31326-201ENSMUST00000191856 1048 ntBASIC21.09■□□□□ 0.97
Gli3Q61602 Gm37917-201ENSMUST00000194711 392 ntBASIC21.09■□□□□ 0.97
Gli3Q61602 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Gli3Q61602 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gli3Q61602 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gli3Q61602 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Gli3Q61602 Gm12957-201ENSMUST00000117835 377 ntBASIC21.08■□□□□ 0.97
Gli3Q61602 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gli3Q61602 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC21.08■□□□□ 0.97
Gli3Q61602 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC21.08■□□□□ 0.97
Gli3Q61602 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC21.08■□□□□ 0.97
Gli3Q61602 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC21.08■□□□□ 0.96
Gli3Q61602 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Gli3Q61602 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Gli3Q61602 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Gli3Q61602 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Gli3Q61602 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms