Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Ptch1Q61115 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ptch1Q61115 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC22.58■■□□□ 1.21
Ptch1Q61115 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ptch1Q61115 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ptch1Q61115 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC22.57■■□□□ 1.2
Ptch1Q61115 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC22.57■■□□□ 1.2
Ptch1Q61115 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC22.57■■□□□ 1.2
Ptch1Q61115 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC22.57■■□□□ 1.2
Ptch1Q61115 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Ptch1Q61115 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
Ptch1Q61115 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ptch1Q61115 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ptch1Q61115 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ptch1Q61115 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ptch1Q61115 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC22.57■■□□□ 1.2
Ptch1Q61115 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC22.57■■□□□ 1.2
Ptch1Q61115 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ptch1Q61115 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ptch1Q61115 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ptch1Q61115 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Ptch1Q61115 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ptch1Q61115 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ptch1Q61115 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Ptch1Q61115 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ptch1Q61115 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ptch1Q61115 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ptch1Q61115 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Ptch1Q61115 Gm8116-201ENSMUST00000182917 1201 ntBASIC22.56■■□□□ 1.2
Ptch1Q61115 Gm18187-201ENSMUST00000196476 984 ntBASIC22.56■■□□□ 1.2
Ptch1Q61115 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ptch1Q61115 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ptch1Q61115 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC22.56■■□□□ 1.2
Ptch1Q61115 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ptch1Q61115 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ptch1Q61115 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ptch1Q61115 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Ptch1Q61115 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ptch1Q61115 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ptch1Q61115 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC22.55■■□□□ 1.2
Ptch1Q61115 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC22.55■■□□□ 1.2
Ptch1Q61115 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC22.55■■□□□ 1.2
Ptch1Q61115 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ptch1Q61115 Gm18737-201ENSMUST00000173594 937 ntBASIC22.55■■□□□ 1.2
Ptch1Q61115 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Ptch1Q61115 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Ptch1Q61115 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Ptch1Q61115 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC22.55■■□□□ 1.2
Ptch1Q61115 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Ptch1Q61115 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ptch1Q61115 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ptch1Q61115 Gm3365-201ENSMUST00000216296 1480 ntBASIC22.55■■□□□ 1.2
Ptch1Q61115 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ptch1Q61115 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ptch1Q61115 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ptch1Q61115 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Ptch1Q61115 Gm16401-202ENSMUST00000197463 2074 ntBASIC22.54■■□□□ 1.2
Ptch1Q61115 Prkcz2-201ENSMUST00000206136 1756 ntBASIC22.54■■□□□ 1.2
Ptch1Q61115 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ptch1Q61115 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Ptch1Q61115 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Ptch1Q61115 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ptch1Q61115 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
Ptch1Q61115 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC22.54■■□□□ 1.2
Ptch1Q61115 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC22.54■■□□□ 1.2
Ptch1Q61115 Gm15483-201ENSMUST00000120338 456 ntBASIC22.54■■□□□ 1.2
Ptch1Q61115 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC22.54■■□□□ 1.2
Ptch1Q61115 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC22.54■■□□□ 1.2
Ptch1Q61115 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Ptch1Q61115 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
Ptch1Q61115 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ptch1Q61115 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ptch1Q61115 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ptch1Q61115 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ptch1Q61115 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Ptch1Q61115 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ptch1Q61115 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ptch1Q61115 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC22.53■■□□□ 1.2
Ptch1Q61115 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
Ptch1Q61115 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
Ptch1Q61115 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Ptch1Q61115 Gm15321-201ENSMUST00000121290 288 ntBASIC22.53■■□□□ 1.2
Ptch1Q61115 Gm14767-201ENSMUST00000121559 586 ntBASIC22.53■■□□□ 1.2
Ptch1Q61115 Gm43433-201ENSMUST00000196573 481 ntBASIC22.53■■□□□ 1.2
Ptch1Q61115 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ptch1Q61115 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ptch1Q61115 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ptch1Q61115 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Ptch1Q61115 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ptch1Q61115 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ptch1Q61115 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Ptch1Q61115 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Ptch1Q61115 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ptch1Q61115 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC22.52■■□□□ 1.2
Ptch1Q61115 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ptch1Q61115 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
Ptch1Q61115 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Ptch1Q61115 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ptch1Q61115 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ptch1Q61115 Gm38225-201ENSMUST00000194001 393 ntBASIC22.52■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms