Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc6a4Q60857 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc6a4Q60857 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Slc6a4Q60857 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc6a4Q60857 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.14■□□□□ 0.17
Slc6a4Q60857 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc6a4Q60857 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc6a4Q60857 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Slc6a4Q60857 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc6a4Q60857 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Slc6a4Q60857 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc6a4Q60857 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc6a4Q60857 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Slc6a4Q60857 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Slc6a4Q60857 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc6a4Q60857 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc6a4Q60857 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.13■□□□□ 0.17
Slc6a4Q60857 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.13■□□□□ 0.17
Slc6a4Q60857 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.13■□□□□ 0.17
Slc6a4Q60857 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc6a4Q60857 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc6a4Q60857 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc6a4Q60857 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc6a4Q60857 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc6a4Q60857 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc6a4Q60857 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.13■□□□□ 0.17
Slc6a4Q60857 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc6a4Q60857 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Slc6a4Q60857 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc6a4Q60857 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Slc6a4Q60857 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc6a4Q60857 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc6a4Q60857 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc6a4Q60857 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc6a4Q60857 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc6a4Q60857 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc6a4Q60857 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc6a4Q60857 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Slc6a4Q60857 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.12■□□□□ 0.17
Slc6a4Q60857 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc6a4Q60857 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc6a4Q60857 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc6a4Q60857 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Slc6a4Q60857 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Slc6a4Q60857 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc6a4Q60857 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc6a4Q60857 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc6a4Q60857 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.12■□□□□ 0.17
Slc6a4Q60857 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.12■□□□□ 0.17
Slc6a4Q60857 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.12■□□□□ 0.17
Slc6a4Q60857 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.12■□□□□ 0.17
Slc6a4Q60857 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.12■□□□□ 0.17
Slc6a4Q60857 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.12■□□□□ 0.17
Slc6a4Q60857 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.12■□□□□ 0.17
Slc6a4Q60857 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.12■□□□□ 0.17
Slc6a4Q60857 Gm19164-201ENSMUST00000210667 640 ntBASIC16.12■□□□□ 0.17
Slc6a4Q60857 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc6a4Q60857 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc6a4Q60857 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc6a4Q60857 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc6a4Q60857 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.12■□□□□ 0.17
Slc6a4Q60857 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc6a4Q60857 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Slc6a4Q60857 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc6a4Q60857 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc6a4Q60857 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc6a4Q60857 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc6a4Q60857 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc6a4Q60857 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc6a4Q60857 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.11■□□□□ 0.17
Slc6a4Q60857 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.11■□□□□ 0.17
Slc6a4Q60857 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Slc6a4Q60857 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Slc6a4Q60857 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.11■□□□□ 0.17
Slc6a4Q60857 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Slc6a4Q60857 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Slc6a4Q60857 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Slc6a4Q60857 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc6a4Q60857 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.11■□□□□ 0.17
Slc6a4Q60857 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc6a4Q60857 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Slc6a4Q60857 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Slc6a4Q60857 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc6a4Q60857 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.11■□□□□ 0.17
Slc6a4Q60857 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.11■□□□□ 0.17
Slc6a4Q60857 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc6a4Q60857 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc6a4Q60857 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc6a4Q60857 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc6a4Q60857 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc6a4Q60857 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Slc6a4Q60857 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.11■□□□□ 0.17
Slc6a4Q60857 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Slc6a4Q60857 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Slc6a4Q60857 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Slc6a4Q60857 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc6a4Q60857 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc6a4Q60857 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc6a4Q60857 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc6a4Q60857 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms