Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Col12a1Q60847 Gm6888-201ENSMUST00000221983 706 ntBASIC15.48■□□□□ 0.07
Col12a1Q60847 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col12a1Q60847 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Col12a1Q60847 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col12a1Q60847 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col12a1Q60847 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Col12a1Q60847 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col12a1Q60847 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col12a1Q60847 Gm23984-201ENSMUST00000157139 203 ntBASIC15.47■□□□□ 0.07
Col12a1Q60847 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Col12a1Q60847 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col12a1Q60847 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col12a1Q60847 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Col12a1Q60847 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Col12a1Q60847 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.47■□□□□ 0.07
Col12a1Q60847 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Col12a1Q60847 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Col12a1Q60847 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Col12a1Q60847 Gm7775-201ENSMUST00000218871 853 ntBASIC15.47■□□□□ 0.07
Col12a1Q60847 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col12a1Q60847 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Col12a1Q60847 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col12a1Q60847 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col12a1Q60847 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col12a1Q60847 Gm37748-201ENSMUST00000194379 1140 ntBASIC15.46■□□□□ 0.07
Col12a1Q60847 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.46■□□□□ 0.07
Col12a1Q60847 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.46■□□□□ 0.07
Col12a1Q60847 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.46■□□□□ 0.07
Col12a1Q60847 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC15.46■□□□□ 0.07
Col12a1Q60847 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col12a1Q60847 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col12a1Q60847 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col12a1Q60847 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col12a1Q60847 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Col12a1Q60847 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Col12a1Q60847 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col12a1Q60847 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col12a1Q60847 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Col12a1Q60847 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col12a1Q60847 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Col12a1Q60847 Gm45668-201ENSMUST00000211271 493 ntBASIC15.46■□□□□ 0.07
Col12a1Q60847 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
Col12a1Q60847 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Col12a1Q60847 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.46■□□□□ 0.06
Col12a1Q60847 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Col12a1Q60847 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Col12a1Q60847 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Col12a1Q60847 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC15.46■□□□□ 0.06
Col12a1Q60847 Gm18766-201ENSMUST00000189811 808 ntBASIC15.46■□□□□ 0.06
Col12a1Q60847 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Col12a1Q60847 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Col12a1Q60847 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Col12a1Q60847 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col12a1Q60847 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col12a1Q60847 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col12a1Q60847 Gm8410-201ENSMUST00000117225 605 ntBASIC15.45■□□□□ 0.06
Col12a1Q60847 Gm6266-201ENSMUST00000203844 806 ntBASIC15.45■□□□□ 0.06
Col12a1Q60847 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col12a1Q60847 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col12a1Q60847 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col12a1Q60847 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col12a1Q60847 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col12a1Q60847 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.45■□□□□ 0.06
Col12a1Q60847 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Col12a1Q60847 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col12a1Q60847 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col12a1Q60847 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col12a1Q60847 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col12a1Q60847 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col12a1Q60847 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Col12a1Q60847 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col12a1Q60847 Gm6973-201ENSMUST00000117080 721 ntBASIC15.45■□□□□ 0.06
Col12a1Q60847 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
Col12a1Q60847 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Col12a1Q60847 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col12a1Q60847 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.44■□□□□ 0.06
Col12a1Q60847 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.44■□□□□ 0.06
Col12a1Q60847 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col12a1Q60847 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Col12a1Q60847 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Col12a1Q60847 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col12a1Q60847 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col12a1Q60847 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Col12a1Q60847 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Col12a1Q60847 Gm8131-201ENSMUST00000213783 1570 ntBASIC15.44■□□□□ 0.06
Col12a1Q60847 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.44■□□□□ 0.06
Col12a1Q60847 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col12a1Q60847 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col12a1Q60847 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col12a1Q60847 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Col12a1Q60847 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col12a1Q60847 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Col12a1Q60847 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.44■□□□□ 0.06
Col12a1Q60847 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Col12a1Q60847 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col12a1Q60847 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col12a1Q60847 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Col12a1Q60847 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.44■□□□□ 0.06
Col12a1Q60847 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms