Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shroom1Q5SX79 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Shroom1Q5SX79 Gm5264-201ENSMUST00000190584 848 ntBASIC16.77■□□□□ 0.28
Shroom1Q5SX79 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.77■□□□□ 0.28
Shroom1Q5SX79 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.77■□□□□ 0.28
Shroom1Q5SX79 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.77■□□□□ 0.28
Shroom1Q5SX79 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.77■□□□□ 0.28
Shroom1Q5SX79 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shroom1Q5SX79 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shroom1Q5SX79 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shroom1Q5SX79 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Shroom1Q5SX79 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shroom1Q5SX79 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.77■□□□□ 0.27
Shroom1Q5SX79 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Shroom1Q5SX79 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Shroom1Q5SX79 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Shroom1Q5SX79 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.77■□□□□ 0.27
Shroom1Q5SX79 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
Shroom1Q5SX79 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Shroom1Q5SX79 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Shroom1Q5SX79 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Shroom1Q5SX79 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Shroom1Q5SX79 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shroom1Q5SX79 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shroom1Q5SX79 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shroom1Q5SX79 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Shroom1Q5SX79 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.76■□□□□ 0.27
Shroom1Q5SX79 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
Shroom1Q5SX79 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.76■□□□□ 0.27
Shroom1Q5SX79 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shroom1Q5SX79 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Shroom1Q5SX79 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shroom1Q5SX79 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shroom1Q5SX79 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Shroom1Q5SX79 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Shroom1Q5SX79 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shroom1Q5SX79 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Shroom1Q5SX79 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shroom1Q5SX79 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shroom1Q5SX79 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Shroom1Q5SX79 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shroom1Q5SX79 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Shroom1Q5SX79 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shroom1Q5SX79 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Shroom1Q5SX79 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shroom1Q5SX79 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shroom1Q5SX79 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.75■□□□□ 0.27
Shroom1Q5SX79 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.75■□□□□ 0.27
Shroom1Q5SX79 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Shroom1Q5SX79 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.75■□□□□ 0.27
Shroom1Q5SX79 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.75■□□□□ 0.27
Shroom1Q5SX79 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Shroom1Q5SX79 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shroom1Q5SX79 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shroom1Q5SX79 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Shroom1Q5SX79 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shroom1Q5SX79 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shroom1Q5SX79 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Shroom1Q5SX79 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shroom1Q5SX79 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shroom1Q5SX79 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Shroom1Q5SX79 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shroom1Q5SX79 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.75■□□□□ 0.27
Shroom1Q5SX79 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shroom1Q5SX79 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shroom1Q5SX79 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.75■□□□□ 0.27
Shroom1Q5SX79 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shroom1Q5SX79 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shroom1Q5SX79 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shroom1Q5SX79 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shroom1Q5SX79 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Shroom1Q5SX79 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shroom1Q5SX79 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shroom1Q5SX79 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shroom1Q5SX79 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shroom1Q5SX79 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shroom1Q5SX79 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shroom1Q5SX79 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shroom1Q5SX79 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Shroom1Q5SX79 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Shroom1Q5SX79 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Shroom1Q5SX79 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shroom1Q5SX79 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Shroom1Q5SX79 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.74■□□□□ 0.27
Shroom1Q5SX79 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.74■□□□□ 0.27
Shroom1Q5SX79 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shroom1Q5SX79 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Shroom1Q5SX79 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shroom1Q5SX79 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.74■□□□□ 0.27
Shroom1Q5SX79 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shroom1Q5SX79 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Shroom1Q5SX79 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Shroom1Q5SX79 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Shroom1Q5SX79 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shroom1Q5SX79 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shroom1Q5SX79 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shroom1Q5SX79 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shroom1Q5SX79 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shroom1Q5SX79 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.74■□□□□ 0.27
Shroom1Q5SX79 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms