Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-1Q5R1I8 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Trav3-1Q5R1I8 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-1Q5R1I8 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-1Q5R1I8 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC10.7□□□□□ -0.7
Trav3-1Q5R1I8 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-1Q5R1I8 Gm38345-201ENSMUST00000192635 1748 ntBASIC10.7□□□□□ -0.7
Trav3-1Q5R1I8 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-1Q5R1I8 Carlr-201ENSMUST00000181515 2574 ntBASIC10.7□□□□□ -0.7
Trav3-1Q5R1I8 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-1Q5R1I8 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-1Q5R1I8 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-1Q5R1I8 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-1Q5R1I8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-1Q5R1I8 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-1Q5R1I8 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-1Q5R1I8 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-1Q5R1I8 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-1Q5R1I8 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-1Q5R1I8 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-1Q5R1I8 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-1Q5R1I8 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Trav3-1Q5R1I8 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Trav3-1Q5R1I8 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-1Q5R1I8 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-1Q5R1I8 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-1Q5R1I8 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav3-1Q5R1I8 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-1Q5R1I8 Serp2-204ENSMUST00000228055 705 ntBASIC10.69□□□□□ -0.7
Trav3-1Q5R1I8 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-1Q5R1I8 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-1Q5R1I8 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-1Q5R1I8 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-1Q5R1I8 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Trav3-1Q5R1I8 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav3-1Q5R1I8 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-1Q5R1I8 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-1Q5R1I8 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Trav3-1Q5R1I8 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-1Q5R1I8 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav3-1Q5R1I8 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav3-1Q5R1I8 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
Trav3-1Q5R1I8 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC10.68□□□□□ -0.7
Trav3-1Q5R1I8 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-1Q5R1I8 Gm43205-201ENSMUST00000198622 1968 ntBASIC10.68□□□□□ -0.7
Trav3-1Q5R1I8 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-1Q5R1I8 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-1Q5R1I8 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-1Q5R1I8 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-1Q5R1I8 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-1Q5R1I8 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC10.68□□□□□ -0.7
Trav3-1Q5R1I8 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-1Q5R1I8 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-1Q5R1I8 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Trav3-1Q5R1I8 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-1Q5R1I8 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-1Q5R1I8 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-1Q5R1I8 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Trav3-1Q5R1I8 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-1Q5R1I8 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-1Q5R1I8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-1Q5R1I8 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Trav3-1Q5R1I8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC10.68□□□□□ -0.7
Trav3-1Q5R1I8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC10.68□□□□□ -0.7
Trav3-1Q5R1I8 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-1Q5R1I8 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC10.68□□□□□ -0.7
Trav3-1Q5R1I8 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-1Q5R1I8 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-1Q5R1I8 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC10.68□□□□□ -0.7
Trav3-1Q5R1I8 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC10.68□□□□□ -0.7
Trav3-1Q5R1I8 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-1Q5R1I8 Gm43321-201ENSMUST00000198897 2409 ntBASIC10.68□□□□□ -0.7
Trav3-1Q5R1I8 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-1Q5R1I8 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC10.68□□□□□ -0.7
Trav3-1Q5R1I8 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav3-1Q5R1I8 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-1Q5R1I8 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-1Q5R1I8 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-1Q5R1I8 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-1Q5R1I8 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-1Q5R1I8 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-1Q5R1I8 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-1Q5R1I8 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-1Q5R1I8 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC10.67□□□□□ -0.7
Trav3-1Q5R1I8 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-1Q5R1I8 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-1Q5R1I8 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Trav3-1Q5R1I8 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Trav3-1Q5R1I8 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Trav3-1Q5R1I8 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
Trav3-1Q5R1I8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-1Q5R1I8 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-1Q5R1I8 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-1Q5R1I8 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC10.67□□□□□ -0.7
Trav3-1Q5R1I8 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Trav3-1Q5R1I8 Fbxl12-205ENSMUST00000140702 1555 ntBASIC10.67□□□□□ -0.7
Trav3-1Q5R1I8 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Trav3-1Q5R1I8 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
Trav3-1Q5R1I8 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav3-1Q5R1I8 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms