Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav6d-4Q5R1I0 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trav6d-4Q5R1I0 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-4Q5R1I0 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-4Q5R1I0 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-4Q5R1I0 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-4Q5R1I0 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav6d-4Q5R1I0 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-4Q5R1I0 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-4Q5R1I0 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-4Q5R1I0 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-4Q5R1I0 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav6d-4Q5R1I0 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.24□□□□□ -0.29
Trav6d-4Q5R1I0 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav6d-4Q5R1I0 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav6d-4Q5R1I0 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-4Q5R1I0 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-4Q5R1I0 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-4Q5R1I0 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-4Q5R1I0 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-4Q5R1I0 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6d-4Q5R1I0 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-4Q5R1I0 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-4Q5R1I0 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-4Q5R1I0 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-4Q5R1I0 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-4Q5R1I0 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav6d-4Q5R1I0 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-4Q5R1I0 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-4Q5R1I0 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.23□□□□□ -0.29
Trav6d-4Q5R1I0 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Trav6d-4Q5R1I0 Gm8344-201ENSMUST00000119813 856 ntBASIC13.23□□□□□ -0.29
Trav6d-4Q5R1I0 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav6d-4Q5R1I0 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-4Q5R1I0 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-4Q5R1I0 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav6d-4Q5R1I0 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.23□□□□□ -0.29
Trav6d-4Q5R1I0 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.23□□□□□ -0.29
Trav6d-4Q5R1I0 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.23□□□□□ -0.29
Trav6d-4Q5R1I0 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-4Q5R1I0 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-4Q5R1I0 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-4Q5R1I0 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-4Q5R1I0 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-4Q5R1I0 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-4Q5R1I0 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-4Q5R1I0 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-4Q5R1I0 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-4Q5R1I0 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-4Q5R1I0 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-4Q5R1I0 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-4Q5R1I0 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav6d-4Q5R1I0 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.23□□□□□ -0.29
Trav6d-4Q5R1I0 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-4Q5R1I0 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-4Q5R1I0 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav6d-4Q5R1I0 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6d-4Q5R1I0 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav6d-4Q5R1I0 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-4Q5R1I0 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-4Q5R1I0 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-4Q5R1I0 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-4Q5R1I0 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-4Q5R1I0 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trav6d-4Q5R1I0 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-4Q5R1I0 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-4Q5R1I0 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trav6d-4Q5R1I0 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-4Q5R1I0 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav6d-4Q5R1I0 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-4Q5R1I0 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-4Q5R1I0 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-4Q5R1I0 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav6d-4Q5R1I0 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-4Q5R1I0 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.22□□□□□ -0.29
Trav6d-4Q5R1I0 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-4Q5R1I0 Gm6550-201ENSMUST00000187574 993 ntBASIC13.22□□□□□ -0.29
Trav6d-4Q5R1I0 Gm6443-201ENSMUST00000203599 874 ntBASIC13.22□□□□□ -0.29
Trav6d-4Q5R1I0 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-4Q5R1I0 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-4Q5R1I0 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-4Q5R1I0 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trav6d-4Q5R1I0 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-4Q5R1I0 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-4Q5R1I0 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-4Q5R1I0 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-4Q5R1I0 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav6d-4Q5R1I0 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-4Q5R1I0 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Trav6d-4Q5R1I0 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-4Q5R1I0 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-4Q5R1I0 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-4Q5R1I0 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav6d-4Q5R1I0 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.22□□□□□ -0.29
Trav6d-4Q5R1I0 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-4Q5R1I0 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-4Q5R1I0 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-4Q5R1I0 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-4Q5R1I0 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6d-4Q5R1I0 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms